Detailed information NTG0932826

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: V3O04_RS01765
• Genome accession: NZ_CP144242
• Coordinates: 380955..382013 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SRM3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 375955..387013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3O04_RS01750 (V3O04_01750)	-	377061..377393 (+)	333	WP_000169602.1	hypothetical protein	-
V3O04_RS01755 (V3O04_01755)	-	377396..378220 (+)	825	WP_096877324.1	putative RNA methyltransferase	-
V3O04_RS01760 (V3O04_01760)	ponA	378238..380793 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
V3O04_RS01765 (V3O04_01765)	pilM	380955..382013 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
V3O04_RS01770 (V3O04_01770)	pilN	382013..382654 (+)	642	WP_000201228.1	PilN domain-containing protein	Machinery gene
V3O04_RS01775 (V3O04_01775)	pilO	382651..383391 (+)	741	WP_000076106.1	type 4a pilus biogenesis protein PilO	Machinery gene
V3O04_RS01780 (V3O04_01780)	pilP	383402..383929 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
V3O04_RS01785 (V3O04_01785)	pilQ	383992..386157 (+)	2166	WP_001017034.1	type IV pilus secretin PilQ	Machinery gene
V3O04_RS01790 (V3O04_01790)	aroK	386169..386738 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=932826 V3O04_RS01765 WP_002014066.1 380955..382013(+) (pilM) [Acinetobacter baumannii strain SRM3]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=932826 V3O04_RS01765 WP_002014066.1 380955..382013(+) (pilM) [Acinetobacter baumannii strain SRM3]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTCTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACAACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423