Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V2B38_RS14950 Genome accession   NZ_CP144224
Coordinates   2844100..2844279 (-) Length   59 a.a.
NCBI ID   WP_289236994.1    Uniprot ID   A0AAJ2NNJ7
Organism   Alkalihalophilus pseudofirmus strain BZ-TG-HK211     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2839100..2849279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2B38_RS14920 (V2B38_14920) - 2839486..2840532 (+) 1047 WP_323466767.1 LCP family protein -
  V2B38_RS14925 (V2B38_14925) fabF 2840610..2841845 (-) 1236 WP_075681119.1 beta-ketoacyl-ACP synthase II -
  V2B38_RS14930 (V2B38_14930) - 2841906..2842841 (-) 936 WP_012959763.1 beta-ketoacyl-ACP synthase III -
  V2B38_RS14935 (V2B38_14935) - 2843055..2843333 (+) 279 WP_012959764.1 hypothetical protein -
  V2B38_RS14940 (V2B38_14940) - 2843352..2843627 (-) 276 WP_323466768.1 penicillin-binding protein -
  V2B38_RS14945 (V2B38_14945) - 2843694..2844026 (-) 333 WP_289234821.1 hypothetical protein -
  V2B38_RS14950 (V2B38_14950) comZ 2844100..2844279 (-) 180 WP_289236994.1 ComZ family protein Regulator
  V2B38_RS14955 (V2B38_14955) - 2844414..2845370 (-) 957 WP_323466769.1 BMP family ABC transporter substrate-binding protein -
  V2B38_RS14960 (V2B38_14960) - 2845746..2847341 (+) 1596 WP_323466770.1 peptide chain release factor 3 -
  V2B38_RS14965 (V2B38_14965) - 2847378..2848127 (-) 750 WP_323466771.1 hypothetical protein -
  V2B38_RS14970 (V2B38_14970) - 2848114..2848779 (-) 666 WP_012959771.1 B12-binding domain-containing protein -
  V2B38_RS14975 (V2B38_14975) - 2849001..2849207 (-) 207 WP_323466772.1 hypothetical protein -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6788.91 Da        Isoelectric Point: 4.2103

>NTDB_id=932694 V2B38_RS14950 WP_289236994.1 2844100..2844279(-) (comZ) [Alkalihalophilus pseudofirmus strain BZ-TG-HK211]
MNMKFMQIAMNHLPEGKKFLDDKGIELNMDDLQPMLELLLNVMSEAYELGLEEGKSESK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=932694 V2B38_RS14950 WP_289236994.1 2844100..2844279(-) (comZ) [Alkalihalophilus pseudofirmus strain BZ-TG-HK211]
ATGAATATGAAATTTATGCAAATTGCAATGAATCATTTACCGGAAGGGAAAAAATTTCTAGATGACAAAGGAATCGAATT
AAACATGGATGATTTGCAGCCCATGCTTGAACTATTGCTTAATGTCATGTCTGAAGCATACGAGCTTGGTCTAGAAGAAG
GTAAATCTGAGAGTAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

50.877

96.61

0.492