Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VX159_RS01055 Genome accession   NZ_CP144212
Coordinates   208476..208862 (+) Length   128 a.a.
NCBI ID   WP_371325480.1    Uniprot ID   -
Organism   Dechloromonas sp. ZY10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 203476..213862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VX159_RS01030 (VX159_01030) - 203575..203787 (+) 213 WP_371324143.1 hypothetical protein -
  VX159_RS01035 (VX159_01035) - 203908..205299 (+) 1392 WP_371324144.1 CorA family divalent cation transporter -
  VX159_RS01040 (VX159_01040) hemL 205399..206694 (-) 1296 WP_371324145.1 glutamate-1-semialdehyde 2,1-aminomutase -
  VX159_RS01045 (VX159_01045) thiE 206714..207358 (-) 645 WP_371324146.1 thiamine phosphate synthase -
  VX159_RS01050 (VX159_01050) - 207351..208241 (-) 891 WP_371324147.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  VX159_RS01055 (VX159_01055) pilG 208476..208862 (+) 387 WP_371325480.1 PleD family two-component system response regulator Regulator
  VX159_RS01060 (VX159_01060) - 208894..209259 (+) 366 WP_371324148.1 response regulator transcription factor -
  VX159_RS01065 (VX159_01065) - 209259..209771 (+) 513 WP_371324149.1 chemotaxis protein CheW -
  VX159_RS01070 (VX159_01070) - 209797..211899 (+) 2103 WP_371324150.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14026.21 Da        Isoelectric Point: 7.1052

>NTDB_id=932607 VX159_RS01055 WP_371325480.1 208476..208862(+) (pilG) [Dechloromonas sp. ZY10]
MVIDDSNTIRRSAEIFMSQAGCKVVLAEDGFDALAKIADHQPALIFCDVMMPRLDGYQTCSLIKKNPRYAHIPVIMLSSK
DGLFDRARGKMVGSDRYLTKPFTRDSLLQIVAAYAEAQAQEAGVANAA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=932607 VX159_RS01055 WP_371325480.1 208476..208862(+) (pilG) [Dechloromonas sp. ZY10]
ATGGTCATCGATGACAGCAACACCATACGCCGCAGCGCCGAGATTTTCATGTCGCAAGCCGGCTGCAAGGTCGTTCTGGC
CGAAGACGGTTTCGATGCCTTGGCCAAGATCGCCGACCACCAGCCCGCCCTGATCTTCTGCGACGTGATGATGCCGCGCC
TCGATGGCTACCAGACCTGTTCGCTGATCAAGAAAAATCCTCGTTATGCCCACATCCCGGTGATCATGCTCTCGTCCAAG
GACGGCCTGTTCGACCGGGCGCGCGGCAAGATGGTCGGTTCCGACCGCTACCTGACCAAGCCCTTCACCCGCGACAGCCT
GCTCCAGATCGTAGCGGCCTATGCCGAGGCACAAGCCCAGGAAGCAGGTGTGGCCAATGCTGCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.684

91.406

0.555