Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8661_RS03130 | Genome accession | NZ_AP028357 |
| Coordinates | 606031..606414 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10544 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 601031..611414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8661_RS03110 (B10544_06140) | - | 601110..603044 (-) | 1935 | WP_283798917.1 | RNB domain-containing ribonuclease | - |
| R8661_RS03115 (B10544_06150) | ilvC | 603163..604185 (+) | 1023 | WP_032581040.1 | ketol-acid reductoisomerase | - |
| R8661_RS03120 (B10544_06160) | - | 604189..605271 (+) | 1083 | WP_032581039.1 | divergent polysaccharide deacetylase family protein | - |
| R8661_RS03125 (B10544_06170) | dprA | 605261..606034 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8661_RS03130 (B10544_06180) | dprB | 606031..606414 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8661_RS03135 (B10544_06190) | - | 606443..607282 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8661_RS03140 (B10544_06200) | msrA | 607458..607955 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8661_RS03145 (B10544_06210) | ppa | 607997..608515 (-) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| R8661_RS03150 (B10544_06220) | adk | 608525..609103 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8661_RS03155 (B10544_06230) | aspS | 609100..610851 (-) | 1752 | WP_002890710.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93258 R8661_RS03130 WP_002852281.1 606031..606414(+) (dprB) [Campylobacter jejuni strain BCH-10544]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93258 R8661_RS03130 WP_002852281.1 606031..606414(+) (dprB) [Campylobacter jejuni strain BCH-10544]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |