Detailed information NTG0932550

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACDK45_RS00860
• Genome accession: NZ_CP167879
• Coordinates: 163173..164171 (+)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NTHi52
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 158173..169171

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDK45_RS00835 (ACDK45_00835)	rbsD	158331..158750 (+)	420	WP_005693672.1	D-ribose pyranase	-
ACDK45_RS00840 (ACDK45_00840)	rbsA	158764..160245 (+)	1482	WP_044364746.1	ribose ABC transporter ATP-binding protein RbsA	-
ACDK45_RS00845 (ACDK45_00845)	rbsC	160261..161229 (+)	969	WP_044364743.1	ribose ABC transporter permease	-
ACDK45_RS00850 (ACDK45_00850)	rbsB	161249..162127 (+)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
ACDK45_RS00855 (ACDK45_00855)	rbsK	162225..163145 (+)	921	WP_011272090.1	ribokinase	-
ACDK45_RS00860 (ACDK45_00860)	cytR	163173..164171 (+)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
ACDK45_RS00865 (ACDK45_00865)	-	164277..164828 (+)	552	WP_005649445.1	TIGR00645 family protein	-
ACDK45_RS00870 (ACDK45_00870)	rraA	164968..165456 (-)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
ACDK45_RS00875 (ACDK45_00875)	menA	165508..166425 (-)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
ACDK45_RS00880 (ACDK45_00880)	tsaA	166487..167206 (+)	720	WP_011272092.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
ACDK45_RS00885 (ACDK45_00885)	tehA	167259..168203 (-)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=932550 ACDK45_RS00860 WP_005659739.1 163173..164171(+) (cytR) [Haemophilus influenzae strain NTHi52]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=932550 ACDK45_RS00860 WP_005659739.1 163173..164171(+) (cytR) [Haemophilus influenzae strain NTHi52]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361