Detailed information NTG0932263

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB4244_RS21210
• Genome accession: NZ_CP167195
• Coordinates: 4352380..4353405 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C600
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4347380..4358405

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4244_RS21190 (AB4244_21190)	metJ	4348441..4348758 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB4244_RS21195 (AB4244_21195)	yiiX	4348942..4349550 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB4244_RS21200 (AB4244_21200)	rpmE	4349611..4349823 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB4244_RS21205 (AB4244_21205)	priA	4350026..4352224 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AB4244_RS21210 (AB4244_21210)	cytR	4352380..4353405 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB4244_RS21215 (AB4244_21215)	ftsN	4353497..4354456 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB4244_RS21220 (AB4244_21220)	hslV	4354549..4355079 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB4244_RS21225 (AB4244_21225)	hslU	4355089..4356420 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB4244_RS21230 (AB4244_21230)	menA	4356487..4357413 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB4244_RS21235 (AB4244_21235)	rraA	4357506..4357991 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB4244_RS21240 (AB4244_21240)	zapB	4358076..4358321 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=932263 AB4244_RS21210 WP_000644904.1 4352380..4353405(+) (cytR) [Escherichia coli strain C600]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=932263 AB4244_RS21210 WP_000644904.1 4352380..4353405(+) (cytR) [Escherichia coli strain C600]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628