Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   V2176_RS03665 Genome accession   NZ_CP143963
Coordinates   724587..725165 (+) Length   192 a.a.
NCBI ID   WP_003180354.1    Uniprot ID   A0A1Y0YMJ8
Organism   Bacillus licheniformis strain FUA2151     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 719587..730165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2176_RS22005 - 720089..720595 (-) 507 WP_370539003.1 methyl-accepting chemotaxis protein -
  V2176_RS22010 - 720896..721267 (-) 372 Protein_697 protoglobin family protein -
  V2176_RS03650 (V2176_03650) - 721488..723038 (-) 1551 WP_414017828.1 FAD-dependent oxidoreductase -
  V2176_RS03655 (V2176_03655) - 723158..724015 (+) 858 WP_330938111.1 SDR family oxidoreductase -
  V2176_RS03660 (V2176_03660) - 724081..724314 (-) 234 WP_003180353.1 IDEAL domain-containing protein -
  V2176_RS03665 (V2176_03665) comK 724587..725165 (+) 579 WP_003180354.1 competence protein ComK Regulator
  V2176_RS03670 (V2176_03670) - 725159..725524 (-) 366 WP_003180357.1 hypothetical protein -
  V2176_RS03675 (V2176_03675) - 725733..726344 (+) 612 WP_003180359.1 TVP38/TMEM64 family protein -
  V2176_RS03680 (V2176_03680) lepB 726357..726875 (+) 519 WP_003180360.1 signal peptidase I -
  V2176_RS03685 (V2176_03685) - 727030..728805 (-) 1776 WP_330938112.1 S8 family peptidase -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22432.65 Da        Isoelectric Point: 8.6274

>NTDB_id=932256 V2176_RS03665 WP_003180354.1 724587..725165(+) (comK) [Bacillus licheniformis strain FUA2151]
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSISSFENQVYRTAWLRTKFIDRIEGN
PMQKKQEFMLYPKEDRNQLIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=932256 V2176_RS03665 WP_003180354.1 724587..725165(+) (comK) [Bacillus licheniformis strain FUA2151]
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCTCATCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACAGGATTGAAGGAAAC
CCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(9-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YMJ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

68.617

97.917

0.672