Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   VXF94_RS04910 Genome accession   NZ_CP143956
Coordinates   991363..992019 (-) Length   218 a.a.
NCBI ID   WP_014470612.1    Uniprot ID   A0AAP7N9L0
Organism   Bacillus amyloliquefaciens strain Fad 108     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 986363..997019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VXF94_RS04890 (VXF94_04890) spxH 986603..987505 (+) 903 WP_013351835.1 protease adaptor protein SpxH -
  VXF94_RS04895 (VXF94_04895) - 987790..987957 (+) 168 WP_003155026.1 hypothetical protein -
  VXF94_RS04900 (VXF94_04900) pepF 987993..989822 (-) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  VXF94_RS04905 (VXF94_04905) - 990051..991211 (-) 1161 WP_013351833.1 competence protein CoiA family protein -
  VXF94_RS04910 (VXF94_04910) mecA 991363..992019 (-) 657 WP_014470612.1 adaptor protein MecA Regulator
  VXF94_RS04920 (VXF94_04920) - 992295..992951 (+) 657 WP_013351831.1 TerC family protein -
  VXF94_RS04925 (VXF94_04925) spx 993009..993404 (-) 396 WP_003327578.1 transcriptional regulator Spx -
  VXF94_RS04930 (VXF94_04930) - 993582..994160 (-) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  VXF94_RS04935 (VXF94_04935) - 994278..995465 (-) 1188 WP_013351829.1 putative glycoside hydrolase -
  VXF94_RS04940 (VXF94_04940) oppF 995573..996490 (-) 918 WP_014470613.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25982.77 Da        Isoelectric Point: 4.0828

>NTDB_id=932189 VXF94_RS04910 WP_014470612.1 991363..992019(-) (mecA) [Bacillus amyloliquefaciens strain Fad 108]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=932189 VXF94_RS04910 WP_014470612.1 991363..992019(-) (mecA) [Bacillus amyloliquefaciens strain Fad 108]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTCT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899