Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8950_RS03100 | Genome accession | NZ_AP028355 |
| Coordinates | 595732..596115 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10539 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 590732..601115
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8950_RS03080 (B10539_06090) | - | 590807..592741 (-) | 1935 | WP_317727463.1 | RNB domain-containing ribonuclease | - |
| R8950_RS03085 (B10539_06100) | ilvC | 592864..593886 (+) | 1023 | WP_002825340.1 | ketol-acid reductoisomerase | - |
| R8950_RS03090 (B10539_06110) | - | 593890..594972 (+) | 1083 | WP_032581039.1 | divergent polysaccharide deacetylase family protein | - |
| R8950_RS03095 (B10539_06120) | dprA | 594962..595735 (+) | 774 | WP_317727464.1 | DNA-processing protein DprA | Machinery gene |
| R8950_RS03100 (B10539_06130) | dprB | 595732..596115 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8950_RS03105 (B10539_06140) | - | 596144..596983 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8950_RS03110 (B10539_06150) | msrA | 597159..597656 (-) | 498 | WP_317727465.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8950_RS03115 (B10539_06160) | ppa | 597698..598216 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8950_RS03120 (B10539_06170) | adk | 598226..598804 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8950_RS03125 (B10539_06180) | aspS | 598801..600552 (-) | 1752 | WP_002890710.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93213 R8950_RS03100 WP_002852281.1 595732..596115(+) (dprB) [Campylobacter jejuni strain BCH-10539]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93213 R8950_RS03100 WP_002852281.1 595732..596115(+) (dprB) [Campylobacter jejuni strain BCH-10539]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |