Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   V2191_RS01435 Genome accession   NZ_CP143907
Coordinates   311986..312543 (+) Length   185 a.a.
NCBI ID   WP_003119423.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain PA7_SE3_14.22_ST654_NDM1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 306986..317543
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2191_RS01415 (V2191_01415) pilR 308262..309599 (+) 1338 WP_003094694.1 two-component system response regulator PilR Regulator
  V2191_RS01420 (V2191_01420) thiO 309645..310739 (-) 1095 WP_020750388.1 glycine oxidase ThiO -
  V2191_RS01425 (V2191_01425) - 310874..311383 (+) 510 WP_003161431.1 GspH/FimT family pseudopilin -
  V2191_RS01430 (V2191_01430) - 311489..311995 (+) 507 WP_003102598.1 GspH/FimT family pseudopilin -
  V2191_RS01435 (V2191_01435) pilV 311986..312543 (+) 558 WP_003119423.1 type 4a pilus minor pilin PilV Machinery gene
  V2191_RS01440 (V2191_01440) pilW 312540..313365 (+) 826 Protein_277 type 4a pilus minor pilin PilW -
  V2191_RS01445 (V2191_01445) pilX 313362..313949 (+) 588 WP_034037187.1 type 4a pilus minor pilin PilX -
  V2191_RS01450 (V2191_01450) pilY1 313961..317452 (+) 3492 WP_003123397.1 type 4a pilus biogenesis protein PilY1 -

Sequence

Protein


Download         Length: 185 a.a.        Molecular weight: 20061.15 Da        Isoelectric Point: 8.2255

>NTDB_id=931950 V2191_RS01435 WP_003119423.1 311986..312543(+) (pilV) [Pseudomonas aeruginosa strain PA7_SE3_14.22_ST654_NDM1]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP

Nucleotide


Download         Length: 558 bp        

>NTDB_id=931950 V2191_RS01435 WP_003119423.1 311986..312543(+) (pilV) [Pseudomonas aeruginosa strain PA7_SE3_14.22_ST654_NDM1]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-34)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Pseudomonas aeruginosa PAK

99.459

100

0.995