Detailed information NTG0931716

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: V2201_RS01720
• Genome accession: NZ_CP143897
• Coordinates: 353953..355101 (-)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain PA27_WM3_03.23_ST27
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 348953..360101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2201_RS01700 (V2201_01700)	-	349691..350875 (-)	1185	WP_023114752.1	cystathionine gamma-synthase	-
V2201_RS01705 (V2201_01705)	-	350872..352245 (-)	1374	WP_003100955.1	pyridoxal-phosphate dependent enzyme	-
V2201_RS01710 (V2201_01710)	-	352488..352892 (-)	405	WP_003084560.1	NINE protein	-
V2201_RS01715 (V2201_01715)	czcD	353046..353945 (+)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
V2201_RS01720 (V2201_01720)	pilU	353953..355101 (-)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
V2201_RS01725 (V2201_01725)	pilT	355279..356313 (-)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
V2201_RS01730 (V2201_01730)	-	356528..357220 (+)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
V2201_RS01735 (V2201_01735)	proC	357232..358053 (+)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
V2201_RS01740 (V2201_01740)	-	358064..358657 (+)	594	WP_003084544.1	YggT family protein	-
V2201_RS01745 (V2201_01745)	-	358654..358950 (+)	297	WP_031628111.1	DUF167 domain-containing protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=931716 V2201_RS01720 WP_003100959.1 353953..355101(-) (pilU) [Pseudomonas aeruginosa strain PA27_WM3_03.23_ST27]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=931716 V2201_RS01720 WP_003100959.1 353953..355101(-) (pilU) [Pseudomonas aeruginosa strain PA27_WM3_03.23_ST27]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTTGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382