Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   U6C02_RS18910 Genome accession   NZ_CP143843
Coordinates   3800160..3800816 (-) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain YM-3     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3795160..3805816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U6C02_RS18890 (U6C02_18890) spxH 3795399..3796301 (+) 903 WP_003155024.1 protease adaptor protein SpxH -
  U6C02_RS18895 (U6C02_18895) - 3796587..3796754 (+) 168 WP_003155026.1 hypothetical protein -
  U6C02_RS18900 (U6C02_18900) pepF 3796792..3798621 (-) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  U6C02_RS18905 (U6C02_18905) - 3798849..3800009 (-) 1161 WP_044053100.1 competence protein CoiA family protein -
  U6C02_RS18910 (U6C02_18910) mecA 3800160..3800816 (-) 657 WP_003155032.1 adaptor protein MecA Regulator
  U6C02_RS18915 (U6C02_18915) - 3801092..3801748 (+) 657 WP_003155033.1 TerC family protein -
  U6C02_RS18920 (U6C02_18920) spx 3801806..3802201 (-) 396 WP_003155034.1 transcriptional regulator Spx -
  U6C02_RS18925 (U6C02_18925) - 3802380..3802958 (-) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  U6C02_RS18930 (U6C02_18930) - 3803076..3804263 (-) 1188 WP_003155036.1 putative glycoside hydrolase -
  U6C02_RS18935 (U6C02_18935) oppF 3804370..3805287 (-) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=931544 U6C02_RS18910 WP_003155032.1 3800160..3800816(-) (mecA) [Bacillus velezensis strain YM-3]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=931544 U6C02_RS18910 WP_003155032.1 3800160..3800816(-) (mecA) [Bacillus velezensis strain YM-3]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895