Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V2I11_RS07095 Genome accession   NZ_CP143783
Coordinates   1362541..1363005 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain JSZ06     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1357541..1368005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2I11_RS07075 - 1358022..1359842 (+) 1821 WP_032874722.1 PAS domain-containing protein -
  V2I11_RS07080 - 1359823..1361036 (-) 1214 Protein_1331 aminotransferase A -
  V2I11_RS07085 - 1361237..1361398 (-) 162 WP_007409608.1 hypothetical protein -
  V2I11_RS07090 cheV 1361587..1362498 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  V2I11_RS07095 kre 1362541..1363005 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V2I11_RS07100 - 1363128..1364420 (-) 1293 WP_007611093.1 MFS transporter -
  V2I11_RS07105 - 1364496..1364990 (-) 495 WP_087920795.1 L,D-transpeptidase family protein -
  V2I11_RS07110 - 1365065..1365928 (-) 864 WP_032874726.1 metallophosphoesterase -
  V2I11_RS07115 fadH 1366072..1366836 (+) 765 WP_032874727.1 2,4-dienoyl-CoA reductase -
  V2I11_RS07120 - 1366950..1367498 (+) 549 WP_032874729.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=931391 V2I11_RS07095 WP_003154622.1 1362541..1363005(-) (kre) [Bacillus velezensis strain JSZ06]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=931391 V2I11_RS07095 WP_003154622.1 1362541..1363005(-) (kre) [Bacillus velezensis strain JSZ06]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAATGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929