Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1579_RS10660 Genome accession   NZ_CP143766
Coordinates   2282705..2283331 (+) Length   208 a.a.
NCBI ID   WP_042719042.1    Uniprot ID   -
Organism   Enterobacter mori strain ECC-007     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2277705..2288331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1579_RS10640 (V1579_10630) - 2278104..2279864 (-) 1761 WP_395302634.1 AAA family ATPase -
  V1579_RS10645 (V1579_10635) matP 2280051..2280503 (+) 453 WP_395302635.1 macrodomain Ter protein MatP -
  V1579_RS10650 (V1579_10640) ompA 2280568..2281623 (-) 1056 WP_010429345.1 porin OmpA -
  V1579_RS10655 (V1579_10645) sulA 2281979..2282488 (-) 510 WP_395302681.1 SOS-induced cell division inhibitor SulA -
  V1579_RS10660 (V1579_10650) sxy/tfoX 2282705..2283331 (+) 627 WP_042719042.1 TfoX/Sxy family DNA transformation protein Regulator
  V1579_RS10665 (V1579_10655) yccS 2283288..2285450 (-) 2163 WP_395302636.1 YccS family putative transporter -
  V1579_RS10670 (V1579_10660) - 2285469..2285915 (-) 447 WP_395302637.1 YccF domain-containing protein -
  V1579_RS10675 (V1579_10665) helD 2286039..2288093 (+) 2055 WP_395302638.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24057.66 Da        Isoelectric Point: 8.7699

>NTDB_id=931286 V1579_RS10660 WP_042719042.1 2282705..2283331(+) (sxy/tfoX) [Enterobacter mori strain ECC-007]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDNAVFAMVSEGELYLRACEESARYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRDKLLQLSSFALDAARKERCQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRELGARKCWLKMRSKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQEHHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=931286 V1579_RS10660 WP_042719042.1 2282705..2283331(+) (sxy/tfoX) [Enterobacter mori strain ECC-007]
ATGAAAAAGATATCTTATGAGCGGATTTATAAATCGCAGGAATACCTCTCACCGTTAGGCGAAATTCATCATCGGGCGCT
ATTCGGTGGGTACACCCTGGCGGTGGATAATGCGGTGTTCGCGATGGTGTCGGAGGGGGAACTCTACCTCCGGGCCTGTG
AAGAAAGTGCCAGGTATTGTGTAAAAAACGCCTCTTCGTTTCTGACGCTGATGAAACGGGGTCGTCCCGTCCTGCTTAAT
TATTATCGGGTGGACGACGGGCTGTGGCAGGACAGGGACAAATTGCTCCAGCTTTCCTCCTTTGCTCTCGACGCGGCAAG
GAAGGAGCGCTGCCAGCGCCATCAGCGCAACCGGCTAAAAGATCTTCCGAACCTGACCTTTCAACTTGAGGTGCTGCTTT
TAGAAGCAGGCATCACGAATGAGGAAACCTTACGGGAACTGGGCGCCAGGAAATGCTGGTTAAAGATGAGGTCCAAAAAC
AAAGCCTTAAGTATTAAGGTGCTGTTCGCGCTGGAAGGTGCCATCGAAGGGCTACATGAAGCGGCGCTCCCGGCCGACAT
TCGCCGGGAGCTGACAGAGTGGTTTAATGCGCTGCCCGAGAGTCAGGAGCATCATTCCTCAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572