Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1609_RS10615 Genome accession   NZ_CP143740
Coordinates   2266508..2267134 (+) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter kobei strain ECC-083     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2261508..2272134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1609_RS10595 (V1609_10580) - 2261906..2263666 (-) 1761 WP_014883250.1 Lon protease family protein -
  V1609_RS10600 (V1609_10585) matP 2263853..2264305 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  V1609_RS10605 (V1609_10590) ompA 2264370..2265425 (-) 1056 WP_014883252.1 porin OmpA -
  V1609_RS10610 (V1609_10595) sulA 2265781..2266290 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  V1609_RS10615 (V1609_10600) sxy/tfoX 2266508..2267134 (+) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  V1609_RS10620 (V1609_10605) yccS 2267091..2269253 (-) 2163 WP_179120688.1 YccS family putative transporter -
  V1609_RS10625 (V1609_10610) - 2269273..2269719 (-) 447 WP_014883256.1 YccF domain-containing protein -
  V1609_RS10630 (V1609_10615) helD 2269843..2271897 (+) 2055 WP_248082103.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=931089 V1609_RS10615 WP_032637053.1 2266508..2267134(+) (sxy/tfoX) [Enterobacter kobei strain ECC-083]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=931089 V1609_RS10615 WP_032637053.1 2266508..2267134(+) (sxy/tfoX) [Enterobacter kobei strain ECC-083]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTAATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558