Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   ACB332_RS07505 Genome accession   NZ_CP167016
Coordinates   1511002..1511481 (-) Length   159 a.a.
NCBI ID   WP_247593483.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 10     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1506002..1516481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB332_RS07485 (ACB332_07485) - 1506171..1506776 (-) 606 WP_002982799.1 response regulator transcription factor -
  ACB332_RS07490 (ACB332_07490) - 1506757..1508319 (-) 1563 WP_085613656.1 hypothetical protein -
  ACB332_RS07495 (ACB332_07495) - 1508359..1510266 (-) 1908 WP_111712507.1 FtsX-like permease family protein -
  ACB332_RS07500 (ACB332_07500) - 1510268..1511005 (-) 738 WP_076639460.1 ABC transporter ATP-binding protein -
  ACB332_RS07505 (ACB332_07505) comA/nlmT 1511002..1511481 (-) 480 WP_247593483.1 ATP-binding cassette domain-containing protein Regulator
  ACB332_RS07510 (ACB332_07510) - 1511537..1513162 (-) 1626 Protein_1418 DUF4135 domain-containing protein -
  ACB332_RS07515 (ACB332_07515) - 1513246..1513401 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ACB332_RS07520 (ACB332_07520) lacG 1513904..1515310 (-) 1407 WP_076639462.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18491.08 Da        Isoelectric Point: 6.3344

>NTDB_id=931040 ACB332_RS07505 WP_247593483.1 1511002..1511481(-) (comA/nlmT) [Streptococcus pyogenes strain Isolate 10]
MFDGDVMYNISLGRESVSGEQVIDTCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=931040 ACB332_RS07505 WP_247593483.1 1511002..1511481(-) (comA/nlmT) [Streptococcus pyogenes strain Isolate 10]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGACACTTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(36-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

39.597

93.711

0.371
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371