Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1584_RS10845 Genome accession   NZ_CP143733
Coordinates   2296324..2296950 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei subsp. xiangfangensis strain ECC-101     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2291324..2301950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1584_RS10825 (V1584_10825) - 2291723..2293483 (-) 1761 WP_368536337.1 AAA family ATPase -
  V1584_RS10830 (V1584_10830) matP 2293670..2294122 (+) 453 WP_368536336.1 macrodomain Ter protein MatP -
  V1584_RS10835 (V1584_10835) ompA 2294188..2295240 (-) 1053 WP_017694761.1 porin OmpA -
  V1584_RS10840 (V1584_10840) sulA 2295597..2296106 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  V1584_RS10845 (V1584_10845) sxy/tfoX 2296324..2296950 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  V1584_RS10850 (V1584_10850) yccS 2296907..2299069 (-) 2163 WP_252054913.1 YccS family putative transporter -
  V1584_RS10855 (V1584_10855) - 2299088..2299534 (-) 447 WP_015570894.1 YccF domain-containing protein -
  V1584_RS10860 (V1584_10860) helD 2299657..2301711 (+) 2055 WP_368536335.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=931000 V1584_RS10845 WP_017384804.1 2296324..2296950(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain ECC-101]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=931000 V1584_RS10845 WP_017384804.1 2296324..2296950(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain ECC-101]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572