Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1585_RS10625 Genome accession   NZ_CP143726
Coordinates   2267557..2268183 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei subsp. xiangfangensis strain ECC-103     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2262557..2273183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1585_RS10605 (V1585_10605) - 2262956..2264716 (-) 1761 WP_017384808.1 Lon protease family protein -
  V1585_RS10610 (V1585_10610) matP 2264903..2265355 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  V1585_RS10615 (V1585_10615) ompA 2265421..2266473 (-) 1053 WP_017694761.1 porin OmpA -
  V1585_RS10620 (V1585_10620) sulA 2266830..2267339 (-) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  V1585_RS10625 (V1585_10625) sxy/tfoX 2267557..2268183 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  V1585_RS10630 (V1585_10630) yccS 2268140..2270302 (-) 2163 WP_063136402.1 YccS family putative transporter -
  V1585_RS10635 (V1585_10635) - 2270321..2270767 (-) 447 WP_003858149.1 YccF domain-containing protein -
  V1585_RS10640 (V1585_10640) helD 2270890..2272944 (+) 2055 WP_047057584.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=930956 V1585_RS10625 WP_017384804.1 2267557..2268183(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain ECC-103]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=930956 V1585_RS10625 WP_017384804.1 2267557..2268183(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain ECC-103]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572