Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1581_RS10815 Genome accession   NZ_CP143725
Coordinates   2268760..2269386 (+) Length   208 a.a.
NCBI ID   WP_041910603.1    Uniprot ID   A0A8E1RPS6
Organism   Enterobacter bugandensis strain ECC-105     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2263760..2274386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1581_RS10795 (V1581_10775) - 2264161..2265921 (-) 1761 WP_395274978.1 AAA family ATPase -
  V1581_RS10800 (V1581_10780) matP 2266107..2266559 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  V1581_RS10805 (V1581_10785) ompA 2266623..2267678 (-) 1056 WP_108780329.1 porin OmpA -
  V1581_RS10810 (V1581_10790) sulA 2268033..2268542 (-) 510 WP_041910604.1 SOS-induced cell division inhibitor SulA -
  V1581_RS10815 (V1581_10795) sxy/tfoX 2268760..2269386 (+) 627 WP_041910603.1 TfoX/Sxy family DNA transformation protein Regulator
  V1581_RS10820 (V1581_10800) yccS 2269343..2271505 (-) 2163 WP_395274979.1 YccS family putative transporter -
  V1581_RS10825 (V1581_10805) - 2271525..2271971 (-) 447 WP_028012605.1 YccF domain-containing protein -
  V1581_RS10830 (V1581_10810) helD 2272095..2274149 (+) 2055 WP_045261704.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.61 Da        Isoelectric Point: 9.2151

>NTDB_id=930933 V1581_RS10815 WP_041910603.1 2268760..2269386(+) (sxy/tfoX) [Enterobacter bugandensis strain ECC-105]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=930933 V1581_RS10815 WP_041910603.1 2268760..2269386(+) (sxy/tfoX) [Enterobacter bugandensis strain ECC-105]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCACTGGGTGAAATTCATCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGCGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCCGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGGCTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGTTGCTCT
TTGAAGCGGGCATCACCAACGAAGAAACGCTGCGGGCGCTTGGCGCTAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCGCTGGAAGGGGCGATCGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTTGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.081

95.192

0.553