Detailed information NTG0093061

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: MWM16_RS03325
• Genome accession: NZ_AP025617
• Coordinates: 579420..580553 (-)
• Length: 377 a.a.
• NCBI ID: WP_011173432.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain SNM7-6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 574420..585553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM16_RS03305 (TthSNM76_06430)	pilQ	575088..577361 (-)	2274	WP_244344966.1	secretin N-terminal domain-containing protein	Machinery gene
MWM16_RS03310 (TthSNM76_06440)	pilW	577358..578236 (-)	879	WP_244344967.1	competence protein	Machinery gene
MWM16_RS03315 (TthSNM76_06450)	pilO	578233..578814 (-)	582	WP_011173434.1	type 4a pilus biogenesis protein PilO	Machinery gene
MWM16_RS03320 (TthSNM76_06460)	pilN	578804..579427 (-)	624	WP_011173433.1	competence protein	Machinery gene
MWM16_RS03325 (TthSNM76_06470)	pilM	579420..580553 (-)	1134	WP_011173432.1	type IV pilus assembly protein PilM	Machinery gene
MWM16_RS03330 (TthSNM76_06480)	-	580688..581692 (-)	1005	WP_011173431.1	homoisocitrate dehydrogenase	-
MWM16_RS03335 (TthSNM76_06490)	-	581747..582238 (-)	492	WP_011173430.1	DUF5317 domain-containing protein	-
MWM16_RS03340 (TthSNM76_06510)	-	582289..583695 (-)	1407	WP_244344968.1	HD domain-containing phosphohydrolase	-
MWM16_RS03355 (TthSNM76_06520)	-	584463..584828 (+)	366	WP_244344969.1	YDG/SRA domain-containing protein	-
MWM16_RS03360 (TthSNM76_06530)	-	584791..585549 (-)	759	WP_244344970.1	type III pantothenate kinase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41399.02 Da
• Isoelectric Point: 4.3805

>NTDB_id=93061 MWM16_RS03325 WP_011173432.1 579420..580553(-) (pilM) [Thermus thermophilus strain SNM7-6]
MFKSLSQLFRPRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVV
TALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEAL
RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLA
AEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEMGYLLGGGSKLR
GLASLLTDTLGVNFEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEPLD

Nucleotide

• Length: 1134 bp

>NTDB_id=93061 MWM16_RS03325 WP_011173432.1 579420..580553(-) (pilM) [Thermus thermophilus strain SNM7-6]
GTGTTCAAAAGCCTTAGCCAGCTCTTCCGACCCAGGGTTGAGGCCCTGGGGTTGGAGATCGGGGCCTCCGCCCTGAAGCT
CGTGGAGGTGTCCGGGAACCCCCCTGCCCTCAAGGCCCTGGCCTCCCGCCCCACCCCGCCTGGCCTCCTGATGGAAGGGA
TGGTGGCCGAGCCCGCCGCGCTGGCCCAGGAGATCAAGGAGCTTCTCCTCGAGGCCCGCACCCGCAAGCGCTACGTGGTC
ACCGCCCTCTCCAACCTGGCGGTCATCCTCCGCCCCATCCAGGTCCCCAAGATGCCCCTCAAGGAGATGGAGGAGGCGGT
GCGCTGGGAGGCGGAGCGCTACATTCCCTTCCCCATTGACGAGGTGGTCCTGGACTTCGCCCCCCTGACCCCCCTCTCCG
AGGTGCAGGAGGGGGAGCAGGTCCAGGTAATGGTGGCGGCGGCGCGGCAGGAGGCGGTGGCGGGGGTCCTCGAAGCCCTG
AGGGGGGCGGGGCTCGTCCCCGTGGTGCTGGACGTGAAGCCCTTCGCCGGGCTTTACCCTCTGGAGGCCAGGCTTGCGGA
GGAGCCCGACCGGGTCTTCCTCGTCCTGGACATCGGGGCCGAGAGCACGAGCCTCGTCCTGCTCCGGGGGGACAAGCCCC
TGGCGGTGCGCGTCCTCACCCTCTCGGGCAAGGACTTCACCGAGGCCATCGCCCGAAGCTTCAACCTGGACCTCCTCGCC
GCCGAGGAGGTGAAGCGGACCTACGGGATGGCCACCCTCCCCACCGAGGACGAGGAGCTCCTCCTGGACTTTGACGCCGA
GCGGGAGCGCTACAGCCCGGGGCGCATCTATGACGCCATCCGCCCGGTGCTGGTGGAGCTCACCCAGGAGCTCCGCCGTA
GCCTTGAGTTCTTCCGCATCCAGCTGGAGGAGGCCTCGCCCGAGATGGGCTACCTCCTGGGCGGGGGGAGCAAGCTCAGG
GGGCTCGCCTCCCTCCTCACCGACACCTTGGGGGTGAACTTTGAGCCCGTCAACCCTTGGGAGGCGGTGGCGGTGGACCC
CAAGCGCTTTGAGTCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTGGCCCTGGGCTTGGCGTTGAGGGGGGTGG
AGCCCCTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Thermus thermophilus HB27	100	100	1