Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | MWM16_RS03320 | Genome accession | NZ_AP025617 |
| Coordinates | 578804..579427 (-) | Length | 207 a.a. |
| NCBI ID | WP_011173433.1 | Uniprot ID | Q72IW7 |
| Organism | Thermus thermophilus strain SNM7-6 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 573804..584427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM16_RS03300 (TthSNM76_06420) | aroC | 573878..575029 (-) | 1152 | WP_011228640.1 | chorismate synthase | - |
| MWM16_RS03305 (TthSNM76_06430) | pilQ | 575088..577361 (-) | 2274 | WP_244344966.1 | secretin N-terminal domain-containing protein | Machinery gene |
| MWM16_RS03310 (TthSNM76_06440) | pilW | 577358..578236 (-) | 879 | WP_244344967.1 | competence protein | Machinery gene |
| MWM16_RS03315 (TthSNM76_06450) | pilO | 578233..578814 (-) | 582 | WP_011173434.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| MWM16_RS03320 (TthSNM76_06460) | pilN | 578804..579427 (-) | 624 | WP_011173433.1 | competence protein | Machinery gene |
| MWM16_RS03325 (TthSNM76_06470) | pilM | 579420..580553 (-) | 1134 | WP_011173432.1 | type IV pilus assembly protein PilM | Machinery gene |
| MWM16_RS03330 (TthSNM76_06480) | - | 580688..581692 (-) | 1005 | WP_011173431.1 | homoisocitrate dehydrogenase | - |
| MWM16_RS03335 (TthSNM76_06490) | - | 581747..582238 (-) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
| MWM16_RS03340 (TthSNM76_06510) | - | 582289..583695 (-) | 1407 | WP_244344968.1 | HD domain-containing phosphohydrolase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23035.51 Da Isoelectric Point: 9.7530
>NTDB_id=93060 MWM16_RS03320 WP_011173433.1 578804..579427(-) (pilN) [Thermus thermophilus strain SNM7-6]
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGATGGESGAR
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGATGGESGAR
Nucleotide
Download Length: 624 bp
>NTDB_id=93060 MWM16_RS03320 WP_011173433.1 578804..579427(-) (pilN) [Thermus thermophilus strain SNM7-6]
TTGATTAGGCTGAACCTTCTCCCCAAAAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCTTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCTTTGAGGCCCTTCATCGCCGAGCTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGTGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAAGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGCAACGGGGGGTGAAAGCGGTGCTCGCTAG
TTGATTAGGCTGAACCTTCTCCCCAAAAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCTTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCTTTGAGGCCCTTCATCGCCGAGCTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGTGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAAGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGCAACGGGGGGTGAAAGCGGTGCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
100 |
100 |
1 |