Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1603_RS11085 Genome accession   NZ_CP143680
Coordinates   2377754..2378380 (+) Length   208 a.a.
NCBI ID   WP_163328629.1    Uniprot ID   -
Organism   Enterobacter sp. ECC-219     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2372754..2383380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1603_RS11065 (V1603_11040) - 2373154..2374914 (-) 1761 WP_395313922.1 AAA family ATPase -
  V1603_RS11070 (V1603_11045) matP 2375101..2375553 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  V1603_RS11075 (V1603_11050) ompA 2375617..2376672 (-) 1056 WP_108780329.1 porin OmpA -
  V1603_RS11080 (V1603_11055) sulA 2377027..2377536 (-) 510 WP_116340904.1 SOS-induced cell division inhibitor SulA -
  V1603_RS11085 (V1603_11060) sxy/tfoX 2377754..2378380 (+) 627 WP_163328629.1 TfoX/Sxy family DNA transformation protein Regulator
  V1603_RS11090 (V1603_11065) yccS 2378337..2380499 (-) 2163 WP_395313923.1 YccS family putative transporter -
  V1603_RS11095 (V1603_11070) - 2380519..2380965 (-) 447 WP_302220859.1 YccF domain-containing protein -
  V1603_RS11100 (V1603_11075) helD 2381089..2383143 (+) 2055 WP_395313924.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23925.51 Da        Isoelectric Point: 9.2151

>NTDB_id=930578 V1603_RS11085 WP_163328629.1 2377754..2378380(+) (sxy/tfoX) [Enterobacter sp. ECC-219]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRALGARESWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSTR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=930578 V1603_RS11085 WP_163328629.1 2377754..2378380(+) (sxy/tfoX) [Enterobacter sp. ECC-219]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCACCGCTGGGTGAAATTCATCATCGTGCGCT
GTTCGGCGGCTATACCCTGGCGGTGGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTTTACCTCCGCGCATGTG
AAGAAAGCGCCAAATACTGTGTAAAAAATGCTGCGTCTTTTTTGACCCTGATGAAGCGGGGTCGCCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGGTTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCTTCGTTCGCGCTCAATGCGGCGAG
AAAAGAGCGTTATCAGCGCCATCAGCGCAATCGACTTAAAGATCTGCCAAACCTGACCTTTCAGCTGGAAGTGTTGCTCC
TTGAAGCGGGCATTACCAACGAAGAAACGCTGCGGGCGCTTGGTGCCAGGGAAAGTTGGCTGAAAATGCGGGCGAAAAAT
AAAGCGCTTGGTATCAAAGTGCTTTTCGCGCTGGAAGGGGCTATTGAAGGGCTACATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAAAATCACTCCACAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567