Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | MWM12_RS10335 | Genome accession | NZ_AP025603 |
| Coordinates | 1864346..1864654 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM1-7 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1859346..1869654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM12_RS10305 (TthSNM17_20120) | - | 1860427..1860891 (+) | 465 | WP_011229049.1 | hypothetical protein | - |
| MWM12_RS10310 (TthSNM17_20130) | pfkA | 1860868..1861836 (-) | 969 | WP_011173968.1 | 6-phosphofructokinase | - |
| MWM12_RS10315 (TthSNM17_20140) | rsmI | 1861833..1862627 (-) | 795 | WP_244341015.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MWM12_RS10320 (TthSNM17_20150) | - | 1862629..1863123 (-) | 495 | WP_244341016.1 | TFIIB-type zinc ribbon-containing protein | - |
| MWM12_RS10325 (TthSNM17_20160) | - | 1863187..1863714 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| MWM12_RS10330 (TthSNM17_20170) | - | 1863747..1864373 (+) | 627 | WP_011173972.1 | YcxB family protein | - |
| MWM12_RS10335 (TthSNM17_20180) | comEA | 1864346..1864654 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| MWM12_RS10340 (TthSNM17_20190) | comA/comEC | 1864651..1866684 (+) | 2034 | WP_244341018.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| MWM12_RS10345 (TthSNM17_20200) | - | 1866672..1867481 (-) | 810 | WP_024119553.1 | ParB/RepB/Spo0J family partition protein | - |
| MWM12_RS10350 (TthSNM17_20210) | soj | 1867465..1868214 (-) | 750 | WP_011173976.1 | chromosome-partitioning ATPase Soj | - |
| MWM12_RS10355 (TthSNM17_20220) | rsmG | 1868208..1868957 (-) | 750 | WP_203971383.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=92997 MWM12_RS10335 WP_024119555.1 1864346..1864654(+) (comEA) [Thermus thermophilus strain SNM1-7]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=92997 MWM12_RS10335 WP_024119555.1 1864346..1864654(+) (comEA) [Thermus thermophilus strain SNM1-7]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |