Detailed information NTG0929962

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V2E43_RS14065
• Genome accession: NZ_CP143589
• Coordinates: 2978169..2979311 (+)
• Length: 380 a.a.
• NCBI ID: WP_059939105.1
• Uniprot ID: -
• Organism: Burkholderia multivorans strain N167
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2973169..2984311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2E43_RS14035 (V2E43_14035)	-	2973591..2974196 (+)	606	WP_012212698.1	50S ribosomal protein L25/general stress protein Ctc	-
V2E43_RS14040 (V2E43_14040)	pth	2974305..2974904 (+)	600	WP_006406630.1	aminoacyl-tRNA hydrolase	-
V2E43_RS14045 (V2E43_14045)	hisC	2975016..2976083 (+)	1068	WP_105762412.1	histidinol-phosphate transaminase	-
V2E43_RS14050 (V2E43_14050)	-	2976161..2976424 (-)	264	WP_006406632.1	YfhL family 4Fe-4S dicluster ferredoxin	-
V2E43_RS14055 (V2E43_14055)	coaD	2976732..2977229 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
V2E43_RS14060 (V2E43_14060)	rsmD	2977341..2977955 (-)	615	WP_006406633.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
V2E43_RS14065 (V2E43_14065)	pilA	2978169..2979311 (+)	1143	WP_059939105.1	signal recognition particle-docking protein FtsY	Machinery gene
V2E43_RS14070 (V2E43_14070)	maiA	2979382..2980026 (-)	645	WP_330727952.1	maleylacetoacetate isomerase	-
V2E43_RS14075 (V2E43_14075)	ybiB	2980200..2981171 (+)	972	WP_330727953.1	DNA-binding protein YbiB	-
V2E43_RS14080 (V2E43_14080)	leuA	2981564..2983210 (+)	1647	WP_053296817.1	2-isopropylmalate synthase	-
V2E43_RS14085 (V2E43_14085)	-	2983346..2983729 (-)	384	WP_006398232.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40350.21 Da
• Isoelectric Point: 4.9500

>NTDB_id=929962 V2E43_RS14065 WP_059939105.1 2978169..2979311(+) (pilA) [Burkholderia multivorans strain N167]
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFEQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1143 bp

>NTDB_id=929962 V2E43_RS14065 WP_059939105.1 2978169..2979311(+) (pilA) [Burkholderia multivorans strain N167]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCTGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTAA
TGACGGTCACGCCGAGCGACAACGGCCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGATGCA
TCGGCGAAGAAATCATGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACGGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCGGGCGTCGACGCGACCGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCGTGGGCCGCCTGACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTGAACGGTGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGAACAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCGGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCACCTCATGGAAGAACTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGATGCGAACACCGGTCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAGGAAT
TCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (98-160)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.589