Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | MWM06_RS11840 | Genome accession | NZ_AP025596 |
| Coordinates | 2120333..2120641 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM1-1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2115333..2125641
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM06_RS11810 (TthSNM11_23610) | - | 2116414..2116878 (+) | 465 | WP_011229049.1 | hypothetical protein | - |
| MWM06_RS11815 (TthSNM11_23620) | pfkA | 2116855..2117823 (-) | 969 | WP_011173968.1 | 6-phosphofructokinase | - |
| MWM06_RS11820 (TthSNM11_23630) | rsmI | 2117820..2118614 (-) | 795 | WP_244341015.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MWM06_RS11825 (TthSNM11_23640) | - | 2118616..2119110 (-) | 495 | WP_244341016.1 | TFIIB-type zinc ribbon-containing protein | - |
| MWM06_RS11830 (TthSNM11_23650) | - | 2119174..2119701 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| MWM06_RS11835 (TthSNM11_23660) | - | 2119734..2120360 (+) | 627 | WP_244360852.1 | YcxB family protein | - |
| MWM06_RS11840 (TthSNM11_23670) | comEA | 2120333..2120641 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| MWM06_RS11845 (TthSNM11_23680) | comA/comEC | 2120638..2122671 (+) | 2034 | WP_244360855.1 | ComEC/Rec2 family competence protein | Machinery gene |
| MWM06_RS11850 (TthSNM11_23690) | - | 2122659..2123468 (-) | 810 | WP_024119553.1 | ParB/RepB/Spo0J family partition protein | - |
| MWM06_RS11855 (TthSNM11_23700) | soj | 2123452..2124201 (-) | 750 | WP_011173976.1 | chromosome-partitioning ATPase Soj | - |
| MWM06_RS11860 (TthSNM11_23710) | rsmG | 2124195..2124944 (-) | 750 | WP_203971383.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=92969 MWM06_RS11840 WP_024119555.1 2120333..2120641(+) (comEA) [Thermus thermophilus strain SNM1-1]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=92969 MWM06_RS11840 WP_024119555.1 2120333..2120641(+) (comEA) [Thermus thermophilus strain SNM1-1]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |