Detailed information NTG0092960

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: MWM06_RS08845
• Genome accession: NZ_AP025596
• Coordinates: 1602237..1603370 (+)
• Length: 377 a.a.
• NCBI ID: WP_011173432.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain SNM1-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1597237..1608370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM06_RS08815 (TthSNM11_17710)	-	1597259..1597975 (-)	717	WP_244340902.1	transposase	-
MWM06_RS08830 (TthSNM11_17730)	-	1599091..1600497 (+)	1407	WP_244360453.1	HD domain-containing phosphohydrolase	-
MWM06_RS08835 (TthSNM11_17740)	-	1600548..1601039 (+)	492	WP_011173430.1	DUF5317 domain-containing protein	-
MWM06_RS08840 (TthSNM11_17750)	-	1601094..1602098 (+)	1005	WP_244340638.1	homoisocitrate dehydrogenase	-
MWM06_RS08845 (TthSNM11_17760)	pilM	1602237..1603370 (+)	1134	WP_011173432.1	type IV pilus assembly protein PilM	Machinery gene
MWM06_RS08850 (TthSNM11_17770)	pilN	1603363..1603986 (+)	624	WP_011228637.1	competence protein	Machinery gene
MWM06_RS08855 (TthSNM11_17780)	pilO	1603976..1604557 (+)	582	WP_011173434.1	type 4a pilus biogenesis protein PilO	Machinery gene
MWM06_RS08860 (TthSNM11_17790)	pilW	1604554..1605432 (+)	879	WP_244360456.1	competence protein	Machinery gene
MWM06_RS08865 (TthSNM11_17800)	pilQ	1605429..1607702 (+)	2274	WP_244360459.1	secretin N-terminal domain-containing protein	Machinery gene

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41399.02 Da
• Isoelectric Point: 4.3805

>NTDB_id=92960 MWM06_RS08845 WP_011173432.1 1602237..1603370(+) (pilM) [Thermus thermophilus strain SNM1-1]
MFKSLSQLFRPRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVV
TALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEAL
RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLA
AEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEMGYLLGGGSKLR
GLASLLTDTLGVNFEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEPLD

Nucleotide

• Length: 1134 bp

>NTDB_id=92960 MWM06_RS08845 WP_011173432.1 1602237..1603370(+) (pilM) [Thermus thermophilus strain SNM1-1]
GTGTTCAAAAGCCTTAGCCAGCTCTTCCGACCCAGGGTTGAGGCCCTGGGGTTGGAGATCGGGGCCTCCGCCCTGAAGCT
CGTGGAGGTGTCCGGGAACCCCCCTGCCCTCAAGGCCCTGGCCTCCCGCCCCACCCCGCCTGGCCTCCTGATGGAAGGGA
TGGTGGCCGAGCCCGCCGCGCTGGCCCAGGAGATCAAGGAGCTTCTCCTCGAGGCCCGCACCCGCAAGCGCTACGTGGTC
ACCGCCCTCTCCAACCTGGCGGTCATCCTCCGCCCCATCCAGGTCCCCAAGATGCCCCTCAAGGAGATGGAGGAGGCGGT
GCGCTGGGAGGCGGAGCGCTACATTCCCTTCCCCATTGACGAGGTGGTCCTGGACTTCGCCCCCCTGACCCCCCTCTCCG
AGGTGCAGGAGGGGGAGCAGGTCCAGGTGATGGTGGCGGCGGCGCGGCAGGAGGCGGTGGCGGGGGTCCTCGAGGCCCTG
AGGGGGGCGGGGCTCGTCCCCGTGGTGCTGGACGTGAAGCCCTTCGCCGGGCTTTACCCTCTGGAGGCCAGGCTTGCGGA
GGAGCCCGACCGGGTCTTCCTCGTCCTGGACATCGGGGCCGAGAGCACGAGCCTCGTCCTGCTCCGGGGGGACAAGCCCC
TGGCGGTGCGCGTCCTCACCCTCTCGGGCAAGGACTTCACCGAGGCCATCGCCCGAAGCTTCAACCTGGACCTCCTCGCC
GCCGAGGAGGTGAAGCGGACCTACGGGATGGCCACCCTCCCCACCGAGGACGAGGAGCTCCTCCTGGACTTTGACGCCGA
GCGGGAGCGCTACAGCCCGGGGCGCATCTACGACGCCATCCGCCCGGTGCTGGTGGAGCTCACCCAGGAGCTCCGCCGTA
GCCTTGAGTTCTTCCGCATCCAGCTGGAGGAGGCCTCGCCCGAGATGGGCTACCTCCTGGGCGGGGGGAGCAAGCTCAGG
GGGCTCGCCTCCCTCCTCACCGACACCCTGGGGGTGAACTTTGAGCCCGTCAACCCCTGGGAGGCGGTGGCGGTGGACCC
CAAGCGCTTTGAGTCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTGGCCCTGGGCTTGGCGTTGAGGGGGGTGG
AGCCCCTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Thermus thermophilus HB27	100	100	1