Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | V1502_RS00595 | Genome accession | NZ_CP143546 |
| Coordinates | 117662..120103 (+) | Length | 813 a.a. |
| NCBI ID | WP_409252507.1 | Uniprot ID | - |
| Organism | Bacillus sp. SCS-153A | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 112662..125103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V1502_RS00580 (V1502_00580) | - | 115557..116021 (+) | 465 | WP_409254261.1 | CtsR family transcriptional regulator | - |
| V1502_RS00585 (V1502_00585) | - | 116037..116579 (+) | 543 | WP_409252505.1 | UvrB/UvrC motif-containing protein | - |
| V1502_RS00590 (V1502_00590) | - | 116579..117649 (+) | 1071 | WP_409252506.1 | protein arginine kinase | - |
| V1502_RS00595 (V1502_00595) | clpC | 117662..120103 (+) | 2442 | WP_409252507.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| V1502_RS00600 (V1502_00600) | radA | 120401..121777 (+) | 1377 | WP_409252508.1 | DNA repair protein RadA | Machinery gene |
| V1502_RS00605 (V1502_00605) | disA | 121782..122855 (+) | 1074 | WP_409252509.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| V1502_RS00610 (V1502_00610) | - | 123071..124165 (+) | 1095 | WP_409252510.1 | PIN/TRAM domain-containing protein | - |
| V1502_RS00615 (V1502_00615) | ispD | 124273..124965 (+) | 693 | WP_409252511.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90734.21 Da Isoelectric Point: 5.6725
>NTDB_id=929539 V1502_RS00595 WP_409252507.1 117662..120103(+) (clpC) [Bacillus sp. SCS-153A]
MMFGRFTERAQKVLALAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKGLAALGLSPDKIQKEVESLIGKGKENSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESNGHQGGTNTNANT
PTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDEPTTDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDESGS
KVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDTEQRLREELEETKKTWKEKQGQENTEVTVEDIAKVV
SSWTGIPVSKLAQTETDKLLKLEEILHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SMFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGADSLKKNKHVGFNIQDGEQDYKDMKGKVMEELKRAFRPEFLNRIDEIIVFHSLEKAHLK
EIVTLMSDQLTNRLKEQDISLELTDAAKEKIADEGFDPEYGARPLRRAIQKHIEDRLSEELLRGTVLTGQNIVIDVEENE
FTVRMKETTNTSS
MMFGRFTERAQKVLALAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKGLAALGLSPDKIQKEVESLIGKGKENSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESNGHQGGTNTNANT
PTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDEPTTDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDESGS
KVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDTEQRLREELEETKKTWKEKQGQENTEVTVEDIAKVV
SSWTGIPVSKLAQTETDKLLKLEEILHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SMFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGADSLKKNKHVGFNIQDGEQDYKDMKGKVMEELKRAFRPEFLNRIDEIIVFHSLEKAHLK
EIVTLMSDQLTNRLKEQDISLELTDAAKEKIADEGFDPEYGARPLRRAIQKHIEDRLSEELLRGTVLTGQNIVIDVEENE
FTVRMKETTNTSS
Nucleotide
Download Length: 2442 bp
>NTDB_id=929539 V1502_RS00595 WP_409252507.1 117662..120103(+) (clpC) [Bacillus sp. SCS-153A]
ATGATGTTTGGCAGATTTACTGAAAGAGCTCAGAAGGTTCTTGCTTTAGCACAGGAAGAGGCAATCCGATTATCTCACAG
CAACATTGGAACAGAACATATCCTTTTAGGATTGGTGCGTGAGGGTGAAGGGATTGCAGCGAAAGGATTGGCTGCCCTTG
GACTGAGCCCGGATAAAATTCAGAAAGAAGTGGAAAGCCTGATCGGGAAAGGTAAAGAAAATTCCCAGACGATCCATTAT
ACACCGAGAGCGAAAAAGGTGATTGAACTTTCAATGGATGAAGCGAGAAAGCTCGGCCACTCTTATGTTGGGACAGAGCA
TATCCTGCTTGGTTTGATCAGAGAAGGAGAAGGTGTAGCGGCCCGTGTATTGAATAATCTAGGGGTCAGCCTGAATAAAG
CAAGACAGCAGGTTCTTCAGCTGCTCGGCAGCAATGAGTCGAACGGCCATCAGGGCGGCACTAACACAAATGCCAACACA
CCGACGTTGGACAGTCTTGCAAGAGACCTGACAGCTATTGCAAGAGAAGACAGCCTTGATCCGGTGATCGGAAGAAGCAA
AGAAATTCAACGTGTGATTGAAGTACTCAGCAGAAGAACAAAGAACAACCCGGTATTGATCGGTGAGCCCGGTGTCGGTA
AAACAGCGATTGCCGAAGGACTGGCGCAGCAGATTGTCAATAATGAGGTGCCTGAAATCCTTCGCGATAAACGCGTGATG
ACGTTGGATATGGGGACAGTTGTAGCGGGGACTAAGTACCGTGGGGAATTTGAAGACCGCCTTAAAAAGGTCATGGATGA
AATCCGCCAGGCCGGTAATATCATCCTCTTCATTGATGAGCTTCACACATTGATCGGTGCAGGCGGAGCGGAAGGTGCAA
TCGATGCATCCAATATACTGAAGCCGTCGCTGGCTCGCGGCGAATTACAATGTATCGGTGCGACGACGCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCTGCATTGGAAAGAAGATTCCAGCCAATCCAGGTTGATGAGCCGACAACAGATGAATC
AATTCAAATCCTTAAAGGGCTTCGTGACCGTTATGAAGCGCACCACCGTGTGTCCATCACGGATGAAGCCATTGAAGCGG
CAGTCAAGCTATCAGACCGCTACATTTCAGACCGTTTCCTGCCGGATAAAGCCATCGACCTTATTGATGAGTCGGGTTCC
AAGGTGAGGCTGCGCTCGTATACGACCCCTCCTAATCTGAAAGAGCTGGAAGTGAAGCTGGAAGAGATCAGGAAAGAGAA
AGATGCAGCAGTCCAGAGTCAGGAATTTGAAAAAGCCGCTTCCCTGAGAGATACGGAACAGCGCTTGCGGGAAGAACTTG
AAGAAACTAAGAAAACCTGGAAAGAAAAGCAGGGTCAGGAGAATACGGAAGTAACCGTCGAAGATATTGCAAAAGTCGTC
TCCAGCTGGACCGGCATCCCTGTCAGCAAGCTGGCTCAGACCGAAACGGATAAACTTCTTAAGCTGGAAGAAATCCTTCA
CTCCCGTGTCATCGGCCAGGATGAGGCAGTGAAGGCTGTATCAAAAGCAGTAAGAAGAGCAAGAGCCGGCTTGAAAGATC
CGAAGAGGCCGATCGGCTCATTCGTTTTCCTTGGACCTACGGGTGTTGGTAAAACAGAATTGGCCAGGGCACTAGCTGAA
TCTATGTTCGGTGACGAGGAAGCGATGATCAGGATTGATATGTCAGAGTATATGGAAAAACACTCGACTTCACGCCTTGT
CGGTTCGCCTCCGGGTTATGTAGGATATGATGAAGGCGGCCAGCTTACAGAAAAGGTACGCCGAAAGCCATATTCAGTCA
TCCTGCTTGATGAAATCGAGAAAGCACATCCTGATGTATTCAATATCCTGCTTCAAGTCCTGGAAGACGGGCGCCTGACT
GACAGTAAAGGCCGTACAGTCGACTTCAGGAATACCGTCCTTATCATGACGTCAAACGTAGGGGCGGACTCACTGAAAAA
GAATAAACATGTCGGCTTTAACATCCAGGATGGTGAACAGGATTATAAAGATATGAAAGGAAAAGTGATGGAGGAGCTGA
AGAGGGCTTTCCGTCCGGAATTCCTGAACCGTATCGATGAAATCATCGTCTTCCATTCTCTTGAAAAAGCCCATCTGAAA
GAAATTGTGACATTGATGTCTGATCAATTGACAAATAGACTGAAAGAACAGGATATCTCCTTAGAACTCACAGACGCAGC
TAAAGAGAAGATTGCCGATGAAGGCTTTGATCCAGAATACGGGGCCCGTCCATTACGCCGTGCGATCCAGAAGCATATCG
AAGACCGTCTTTCTGAAGAGCTGTTGAGAGGCACGGTCTTGACAGGTCAGAATATTGTCATTGATGTAGAAGAGAATGAA
TTCACTGTCCGGATGAAAGAGACAACGAATACATCTTCATAA
ATGATGTTTGGCAGATTTACTGAAAGAGCTCAGAAGGTTCTTGCTTTAGCACAGGAAGAGGCAATCCGATTATCTCACAG
CAACATTGGAACAGAACATATCCTTTTAGGATTGGTGCGTGAGGGTGAAGGGATTGCAGCGAAAGGATTGGCTGCCCTTG
GACTGAGCCCGGATAAAATTCAGAAAGAAGTGGAAAGCCTGATCGGGAAAGGTAAAGAAAATTCCCAGACGATCCATTAT
ACACCGAGAGCGAAAAAGGTGATTGAACTTTCAATGGATGAAGCGAGAAAGCTCGGCCACTCTTATGTTGGGACAGAGCA
TATCCTGCTTGGTTTGATCAGAGAAGGAGAAGGTGTAGCGGCCCGTGTATTGAATAATCTAGGGGTCAGCCTGAATAAAG
CAAGACAGCAGGTTCTTCAGCTGCTCGGCAGCAATGAGTCGAACGGCCATCAGGGCGGCACTAACACAAATGCCAACACA
CCGACGTTGGACAGTCTTGCAAGAGACCTGACAGCTATTGCAAGAGAAGACAGCCTTGATCCGGTGATCGGAAGAAGCAA
AGAAATTCAACGTGTGATTGAAGTACTCAGCAGAAGAACAAAGAACAACCCGGTATTGATCGGTGAGCCCGGTGTCGGTA
AAACAGCGATTGCCGAAGGACTGGCGCAGCAGATTGTCAATAATGAGGTGCCTGAAATCCTTCGCGATAAACGCGTGATG
ACGTTGGATATGGGGACAGTTGTAGCGGGGACTAAGTACCGTGGGGAATTTGAAGACCGCCTTAAAAAGGTCATGGATGA
AATCCGCCAGGCCGGTAATATCATCCTCTTCATTGATGAGCTTCACACATTGATCGGTGCAGGCGGAGCGGAAGGTGCAA
TCGATGCATCCAATATACTGAAGCCGTCGCTGGCTCGCGGCGAATTACAATGTATCGGTGCGACGACGCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCTGCATTGGAAAGAAGATTCCAGCCAATCCAGGTTGATGAGCCGACAACAGATGAATC
AATTCAAATCCTTAAAGGGCTTCGTGACCGTTATGAAGCGCACCACCGTGTGTCCATCACGGATGAAGCCATTGAAGCGG
CAGTCAAGCTATCAGACCGCTACATTTCAGACCGTTTCCTGCCGGATAAAGCCATCGACCTTATTGATGAGTCGGGTTCC
AAGGTGAGGCTGCGCTCGTATACGACCCCTCCTAATCTGAAAGAGCTGGAAGTGAAGCTGGAAGAGATCAGGAAAGAGAA
AGATGCAGCAGTCCAGAGTCAGGAATTTGAAAAAGCCGCTTCCCTGAGAGATACGGAACAGCGCTTGCGGGAAGAACTTG
AAGAAACTAAGAAAACCTGGAAAGAAAAGCAGGGTCAGGAGAATACGGAAGTAACCGTCGAAGATATTGCAAAAGTCGTC
TCCAGCTGGACCGGCATCCCTGTCAGCAAGCTGGCTCAGACCGAAACGGATAAACTTCTTAAGCTGGAAGAAATCCTTCA
CTCCCGTGTCATCGGCCAGGATGAGGCAGTGAAGGCTGTATCAAAAGCAGTAAGAAGAGCAAGAGCCGGCTTGAAAGATC
CGAAGAGGCCGATCGGCTCATTCGTTTTCCTTGGACCTACGGGTGTTGGTAAAACAGAATTGGCCAGGGCACTAGCTGAA
TCTATGTTCGGTGACGAGGAAGCGATGATCAGGATTGATATGTCAGAGTATATGGAAAAACACTCGACTTCACGCCTTGT
CGGTTCGCCTCCGGGTTATGTAGGATATGATGAAGGCGGCCAGCTTACAGAAAAGGTACGCCGAAAGCCATATTCAGTCA
TCCTGCTTGATGAAATCGAGAAAGCACATCCTGATGTATTCAATATCCTGCTTCAAGTCCTGGAAGACGGGCGCCTGACT
GACAGTAAAGGCCGTACAGTCGACTTCAGGAATACCGTCCTTATCATGACGTCAAACGTAGGGGCGGACTCACTGAAAAA
GAATAAACATGTCGGCTTTAACATCCAGGATGGTGAACAGGATTATAAAGATATGAAAGGAAAAGTGATGGAGGAGCTGA
AGAGGGCTTTCCGTCCGGAATTCCTGAACCGTATCGATGAAATCATCGTCTTCCATTCTCTTGAAAAAGCCCATCTGAAA
GAAATTGTGACATTGATGTCTGATCAATTGACAAATAGACTGAAAGAACAGGATATCTCCTTAGAACTCACAGACGCAGC
TAAAGAGAAGATTGCCGATGAAGGCTTTGATCCAGAATACGGGGCCCGTCCATTACGCCGTGCGATCCAGAAGCATATCG
AAGACCGTCTTTCTGAAGAGCTGTTGAGAGGCACGGTCTTGACAGGTCAGAATATTGTCATTGATGTAGAAGAGAATGAA
TTCACTGTCCGGATGAAAGAGACAACGAATACATCTTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
89.259 |
99.631 |
0.889 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50 |
98.647 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
45.769 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.53 |
100 |
0.47 |
| clpC | Streptococcus mutans UA159 |
44.458 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
46 |
98.401 |
0.453 |
| clpC | Streptococcus pneumoniae Rx1 |
46 |
98.401 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.875 |
98.401 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.278 |
88.561 |
0.445 |
| clpE | Streptococcus mutans UA159 |
55.698 |
76.63 |
0.427 |
| clpE | Streptococcus pneumoniae Rx1 |
54.896 |
76.63 |
0.421 |
| clpE | Streptococcus pneumoniae D39 |
54.896 |
76.63 |
0.421 |
| clpE | Streptococcus pneumoniae R6 |
54.896 |
76.63 |
0.421 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.823 |
76.507 |
0.419 |