Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | V1501_RS14690 | Genome accession | NZ_CP143545 |
| Coordinates | 2904639..2905709 (-) | Length | 356 a.a. |
| NCBI ID | WP_409293384.1 | Uniprot ID | - |
| Organism | Peribacillus sp. SCS-37 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2899639..2910709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V1501_RS14645 (V1501_14645) | - | 2900211..2900996 (+) | 786 | WP_409289237.1 | YqhG family protein | - |
| V1501_RS14650 (V1501_14650) | - | 2901027..2901209 (-) | 183 | WP_409289239.1 | YqzE family protein | - |
| V1501_RS14655 (V1501_14655) | - | 2901242..2901739 (-) | 498 | WP_409289240.1 | shikimate kinase | - |
| V1501_RS14660 (V1501_14660) | comGG | 2901755..2902147 (-) | 393 | WP_409289242.1 | competence type IV pilus minor pilin ComGG | - |
| V1501_RS14665 (V1501_14665) | comGF | 2902123..2902557 (-) | 435 | WP_409289244.1 | competence type IV pilus minor pilin ComGF | - |
| V1501_RS14670 (V1501_14670) | - | 2902538..2902873 (-) | 336 | WP_409289246.1 | hypothetical protein | - |
| V1501_RS14675 (V1501_14675) | comGD | 2902863..2903336 (-) | 474 | WP_409289247.1 | competence type IV pilus minor pilin ComGD | - |
| V1501_RS14680 (V1501_14680) | comGC | 2903302..2903607 (-) | 306 | WP_409289249.1 | competence type IV pilus major pilin ComGC | - |
| V1501_RS14685 (V1501_14685) | comGB | 2903621..2904652 (-) | 1032 | WP_409289251.1 | competence type IV pilus assembly protein ComGB | - |
| V1501_RS14690 (V1501_14690) | comGA | 2904639..2905709 (-) | 1071 | WP_409293384.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| V1501_RS14695 (V1501_14695) | - | 2905878..2906597 (-) | 720 | WP_409289253.1 | ABC transporter ATP-binding protein | - |
| V1501_RS14700 (V1501_14700) | - | 2906597..2908231 (-) | 1635 | WP_409289254.1 | ABC transporter permease | - |
| V1501_RS14705 (V1501_14705) | - | 2908347..2909432 (-) | 1086 | WP_409289256.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| V1501_RS14710 (V1501_14710) | - | 2909664..2909909 (+) | 246 | WP_409289258.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39882.33 Da Isoelectric Point: 9.5137
>NTDB_id=929510 V1501_RS14690 WP_409293384.1 2904639..2905709(-) (comGA) [Peribacillus sp. SCS-37]
MGAIERTADRILTFGYKEQASDIHIIPRKEDFLIQLRIGSNLVPLEVLPVKQAYRLLSHFKFLASMDIGEKRRPQSGSFS
VAMGKTTIGLRLSTLPTAFAESLVIRLIPQQQILPLQRISLFPKTTSRLLALLRHSHGLMIFTGPTGSGKTTTLYSLLNH
AGEFINRNIITLEDPIENHSEQVLQVQINEKAGITYSVGLKAALRHDPDIIMVGEIRDAETARIAVRASLTGHLILSTMH
TRDAKGAVYWLLEFGLSLHEIKQTLIAVTAQRLLELKCPVCKGECRGNCDKRLKSRRASVYELLYGRTLGSVIGEAEGKS
EKIKPRELKDEISKAVALGYVTDAEFYKWVYEYENE
MGAIERTADRILTFGYKEQASDIHIIPRKEDFLIQLRIGSNLVPLEVLPVKQAYRLLSHFKFLASMDIGEKRRPQSGSFS
VAMGKTTIGLRLSTLPTAFAESLVIRLIPQQQILPLQRISLFPKTTSRLLALLRHSHGLMIFTGPTGSGKTTTLYSLLNH
AGEFINRNIITLEDPIENHSEQVLQVQINEKAGITYSVGLKAALRHDPDIIMVGEIRDAETARIAVRASLTGHLILSTMH
TRDAKGAVYWLLEFGLSLHEIKQTLIAVTAQRLLELKCPVCKGECRGNCDKRLKSRRASVYELLYGRTLGSVIGEAEGKS
EKIKPRELKDEISKAVALGYVTDAEFYKWVYEYENE
Nucleotide
Download Length: 1071 bp
>NTDB_id=929510 V1501_RS14690 WP_409293384.1 2904639..2905709(-) (comGA) [Peribacillus sp. SCS-37]
ATTGGAGCTATTGAAAGGACAGCCGACCGAATATTGACGTTCGGCTATAAGGAGCAGGCCTCCGACATCCACATCATTCC
CCGAAAAGAGGATTTCCTCATCCAGCTCCGTATTGGCAGCAATCTTGTCCCCCTTGAAGTTTTACCCGTAAAACAGGCCT
ACCGGCTGCTGTCCCATTTTAAGTTCCTCGCATCCATGGATATTGGTGAAAAGAGGAGACCACAGAGCGGTTCTTTCTCC
GTCGCAATGGGGAAGACCACAATCGGGCTCAGGCTGTCCACACTCCCCACAGCCTTTGCAGAAAGCCTTGTCATCCGACT
CATTCCCCAGCAGCAGATACTCCCGCTTCAGCGAATCTCTTTATTTCCTAAAACAACATCCAGGCTTCTTGCGCTGCTCC
GACACTCACACGGATTGATGATCTTTACCGGTCCGACAGGGAGCGGCAAGACAACAACTCTATATTCCCTGCTGAACCAT
GCAGGGGAATTCATCAACCGCAATATCATCACACTGGAAGATCCGATTGAAAACCATTCTGAACAGGTGCTGCAGGTCCA
GATCAATGAAAAAGCGGGCATCACTTACTCGGTCGGTCTTAAGGCAGCCCTCAGGCATGATCCTGATATCATCATGGTTG
GCGAAATCAGGGATGCCGAGACAGCCCGCATCGCAGTGAGGGCCTCATTGACCGGCCATCTTATCCTTTCGACCATGCAT
ACCCGGGATGCCAAAGGCGCCGTCTACTGGCTGCTGGAATTCGGGCTGAGTCTGCATGAAATAAAGCAGACCCTGATTGC
GGTGACAGCTCAGAGGCTTCTTGAATTAAAGTGTCCCGTCTGCAAAGGGGAGTGCAGAGGGAATTGCGACAAAAGACTGA
AAAGCAGGCGGGCCAGTGTTTATGAGCTGCTTTACGGGAGGACTCTTGGTTCCGTCATAGGAGAAGCGGAAGGAAAATCA
GAAAAGATCAAGCCAAGAGAGCTCAAGGATGAAATCAGCAAGGCTGTCGCCCTTGGATATGTTACAGATGCAGAGTTTTA
CAAATGGGTCTATGAATATGAAAACGAGTAA
ATTGGAGCTATTGAAAGGACAGCCGACCGAATATTGACGTTCGGCTATAAGGAGCAGGCCTCCGACATCCACATCATTCC
CCGAAAAGAGGATTTCCTCATCCAGCTCCGTATTGGCAGCAATCTTGTCCCCCTTGAAGTTTTACCCGTAAAACAGGCCT
ACCGGCTGCTGTCCCATTTTAAGTTCCTCGCATCCATGGATATTGGTGAAAAGAGGAGACCACAGAGCGGTTCTTTCTCC
GTCGCAATGGGGAAGACCACAATCGGGCTCAGGCTGTCCACACTCCCCACAGCCTTTGCAGAAAGCCTTGTCATCCGACT
CATTCCCCAGCAGCAGATACTCCCGCTTCAGCGAATCTCTTTATTTCCTAAAACAACATCCAGGCTTCTTGCGCTGCTCC
GACACTCACACGGATTGATGATCTTTACCGGTCCGACAGGGAGCGGCAAGACAACAACTCTATATTCCCTGCTGAACCAT
GCAGGGGAATTCATCAACCGCAATATCATCACACTGGAAGATCCGATTGAAAACCATTCTGAACAGGTGCTGCAGGTCCA
GATCAATGAAAAAGCGGGCATCACTTACTCGGTCGGTCTTAAGGCAGCCCTCAGGCATGATCCTGATATCATCATGGTTG
GCGAAATCAGGGATGCCGAGACAGCCCGCATCGCAGTGAGGGCCTCATTGACCGGCCATCTTATCCTTTCGACCATGCAT
ACCCGGGATGCCAAAGGCGCCGTCTACTGGCTGCTGGAATTCGGGCTGAGTCTGCATGAAATAAAGCAGACCCTGATTGC
GGTGACAGCTCAGAGGCTTCTTGAATTAAAGTGTCCCGTCTGCAAAGGGGAGTGCAGAGGGAATTGCGACAAAAGACTGA
AAAGCAGGCGGGCCAGTGTTTATGAGCTGCTTTACGGGAGGACTCTTGGTTCCGTCATAGGAGAAGCGGAAGGAAAATCA
GAAAAGATCAAGCCAAGAGAGCTCAAGGATGAAATCAGCAAGGCTGTCGCCCTTGGATATGTTACAGATGCAGAGTTTTA
CAAATGGGTCTATGAATATGAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
54.545 |
98.876 |
0.539 |