Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ACB350_RS00265 Genome accession   NZ_CP166999
Coordinates   35826..36581 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain Isolate 34     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 30826..41581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB350_RS00255 (ACB350_00255) pcsB 33229..34425 (+) 1197 WP_011017226.1 peptidoglycan hydrolase PcsB -
  ACB350_RS00260 (ACB350_00260) - 34678..35640 (+) 963 WP_030127613.1 ribose-phosphate diphosphokinase -
  ACB350_RS00265 (ACB350_00265) recO 35826..36581 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  ACB350_RS00270 (ACB350_00270) plsX 36684..37691 (+) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  ACB350_RS00275 (ACB350_00275) - 37684..37926 (+) 243 WP_002993445.1 phosphopantetheine-binding protein -
  ACB350_RS00280 (ACB350_00280) purC 38077..38781 (+) 705 WP_028797123.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=929445 ACB350_RS00265 WP_002986719.1 35826..36581(+) (recO) [Streptococcus pyogenes strain Isolate 34]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=929445 ACB350_RS00265 WP_002986719.1 35826..36581(+) (recO) [Streptococcus pyogenes strain Isolate 34]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGTACTGATTTA
CCACTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602