Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACA109_RS03540 Genome accession   NZ_CP166872
Coordinates   654743..655483 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 24EBSta0529     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 649743..660483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACA109_RS03515 (ACA109_03515) yhaM 650161..651102 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  ACA109_RS03520 (ACA109_03520) - 651223..652185 (-) 963 WP_371257131.1 peptidylprolyl isomerase -
  ACA109_RS03525 (ACA109_03525) - 652390..652947 (-) 558 WP_000477957.1 DUF3267 domain-containing protein -
  ACA109_RS03530 (ACA109_03530) - 653680..654045 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  ACA109_RS03535 (ACA109_03535) - 654187..654609 (-) 423 WP_000004981.1 HIT family protein -
  ACA109_RS03540 (ACA109_03540) pptA 654743..655483 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  ACA109_RS03545 (ACA109_03545) - 655476..656699 (+) 1224 WP_371257132.1 ABC transporter permease -
  ACA109_RS03550 (ACA109_03550) traP 656823..657326 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  ACA109_RS03555 (ACA109_03555) - 657512..657598 (+) 87 WP_031875110.1 hypothetical protein -
  ACA109_RS03560 (ACA109_03560) hemE 657588..658625 (+) 1038 WP_371257133.1 uroporphyrinogen decarboxylase -
  ACA109_RS03565 (ACA109_03565) hemH 658683..659606 (+) 924 WP_371257134.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=929178 ACA109_RS03540 WP_000216874.1 654743..655483(+) (pptA) [Staphylococcus aureus strain 24EBSta0529]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=929178 ACA109_RS03540 WP_000216874.1 654743..655483(+) (pptA) [Staphylococcus aureus strain 24EBSta0529]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTAAATGGCGCCGGTAAGAGTACGACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACCGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545