Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB3239_RS21265 Genome accession   NZ_CP166831
Coordinates   4095111..4095905 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain TE3T-UV25     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4090111..4100905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3239_RS21240 (AB3239_21240) rocD 4090687..4091892 (-) 1206 WP_033882758.1 ornithine aminotransferase -
  AB3239_RS21245 (AB3239_21245) rocR 4092133..4093518 (+) 1386 WP_015385164.1 arginine utilization regulatory protein RocR -
  AB3239_RS21250 (AB3239_21250) - 4093500..4093661 (-) 162 Protein_4132 ATP-binding protein -
  AB3239_RS21255 (AB3239_21255) - 4093680..4093807 (-) 128 Protein_4133 hypothetical protein -
  AB3239_RS21260 (AB3239_21260) htrA 4093827..4095029 (-) 1203 WP_370957103.1 serine protease HtrC Regulator
  AB3239_RS21265 (AB3239_21265) vicX 4095111..4095905 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  AB3239_RS21270 (AB3239_21270) walI 4095927..4096769 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  AB3239_RS21275 (AB3239_21275) walH 4096756..4098123 (-) 1368 WP_248719398.1 WalRK two-component regulatory system regulator WalH -
  AB3239_RS21280 (AB3239_21280) walK 4098113..4099948 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  AB3239_RS21285 (AB3239_21285) walR 4099956..4100663 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=929158 AB3239_RS21265 WP_003242676.1 4095111..4095905(-) (vicX) [Bacillus subtilis strain TE3T-UV25]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=929158 AB3239_RS21265 WP_003242676.1 4095111..4095905(-) (vicX) [Bacillus subtilis strain TE3T-UV25]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53