Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VR624_RS01505 Genome accession   NZ_CP143432
Coordinates   303716..304123 (+) Length   135 a.a.
NCBI ID   WP_019828024.1    Uniprot ID   A0A8I1FPA4
Organism   Pseudomonas psychrophila strain A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 298716..309123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VR624_RS01475 (VR624_01475) - 298755..299759 (-) 1005 WP_019828034.1 aspartate carbamoyltransferase catalytic subunit -
  VR624_RS01480 (VR624_01480) pyrR 299772..300278 (-) 507 WP_019828032.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  VR624_RS01485 (VR624_01485) ruvX 300363..300803 (-) 441 WP_019828031.1 Holliday junction resolvase RuvX -
  VR624_RS01490 (VR624_01490) - 300803..301375 (-) 573 WP_019828028.1 YqgE/AlgH family protein -
  VR624_RS01495 (VR624_01495) - 301538..302437 (-) 900 WP_048352497.1 energy transducer TonB -
  VR624_RS01500 (VR624_01500) gshB 302515..303468 (-) 954 WP_046810386.1 glutathione synthase -
  VR624_RS01505 (VR624_01505) pilG 303716..304123 (+) 408 WP_019828024.1 twitching motility response regulator PilG Regulator
  VR624_RS01510 (VR624_01510) pilH 304166..304543 (+) 378 WP_019828023.1 twitching motility response regulator PilH -
  VR624_RS01515 (VR624_01515) - 304554..305093 (+) 540 WP_048352498.1 chemotaxis protein CheW -
  VR624_RS01520 (VR624_01520) - 305135..307192 (+) 2058 WP_019828020.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14925.45 Da        Isoelectric Point: 9.1707

>NTDB_id=929053 VR624_RS01505 WP_019828024.1 303716..304123(+) (pilG) [Pseudomonas psychrophila strain A]
MEKHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIVDHHPHIIFVDIMMPRLDGYQTCALIKSNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSRDELLSAIKAHVPAFNIVQSAQ

Nucleotide


Download         Length: 408 bp        

>NTDB_id=929053 VR624_RS01505 WP_019828024.1 303716..304123(+) (pilG) [Pseudomonas psychrophila strain A]
ATGGAAAAGCATTCCAGCGCCTTGAAGGTGATGGTGATCGACGATTCGAAAACCATTCGCCGCACCGCCGAAACGCTGCT
GAAAAACGTGGGCTGCGAGGTCATTACCGCCATCGACGGTTTCGACGCGCTGGCCAAAATTGTTGACCATCATCCGCACA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGATCAAGAGCAACCGGGCGTTCAAG
TCGACCCCCGTGATCATGCTGTCATCCAAGGACGGCCTGTTCGACAAGGCCAAGGGCCGGATTGTTGGTTCTGATCAATT
TTTGACCAAGCCTTTTAGCCGCGATGAATTGCTGAGCGCAATCAAGGCCCATGTGCCAGCCTTCAACATCGTACAAAGTG
CTCAATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.441

94.074

0.681
  vicR Streptococcus mutans UA159

39.683

93.333

0.37