Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8901_RS03100 | Genome accession | NZ_AP028342 |
| Coordinates | 597215..597598 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10330 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 592215..602598
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8901_RS03080 (B10330_06120) | - | 592294..594228 (-) | 1935 | WP_317725374.1 | RNB domain-containing ribonuclease | - |
| R8901_RS03085 (B10330_06130) | ilvC | 594347..595369 (+) | 1023 | WP_032581040.1 | ketol-acid reductoisomerase | - |
| R8901_RS03090 (B10330_06140) | - | 595373..596455 (+) | 1083 | WP_032581039.1 | divergent polysaccharide deacetylase family protein | - |
| R8901_RS03095 (B10330_06150) | dprA | 596445..597218 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8901_RS03100 (B10330_06160) | dprB | 597215..597598 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8901_RS03105 (B10330_06170) | - | 597627..598466 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8901_RS03110 (B10330_06180) | msrA | 598642..599139 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8901_RS03115 (B10330_06190) | ppa | 599181..599699 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8901_RS03120 (B10330_06200) | adk | 599709..600287 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8901_RS03125 (B10330_06210) | aspS | 600284..602035 (-) | 1752 | WP_002890710.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=92893 R8901_RS03100 WP_002852281.1 597215..597598(+) (dprB) [Campylobacter jejuni strain BCH-10330]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=92893 R8901_RS03100 WP_002852281.1 597215..597598(+) (dprB) [Campylobacter jejuni strain BCH-10330]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |