Detailed information NTG0928838

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: V1235_RS18710
• Genome accession: NZ_CP143348
• Coordinates: 3844415..3845569 (+)
• Length: 384 a.a.
• NCBI ID: WP_000755280.1
• Uniprot ID: A0A009S0N9
• Organism: Acinetobacter baumannii strain 2023CK-01512
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3839415..3850569

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V1235_RS18685 (V1235_18665)	-	3839603..3840817 (+)	1215	WP_001177956.1	oxygenase MpaB family protein	-
V1235_RS18690 (V1235_18670)	-	3840887..3841093 (-)	207	WP_000182542.1	hypothetical protein	-
V1235_RS18695 (V1235_18675)	-	3841143..3843224 (-)	2082	WP_001120682.1	TonB-dependent copper receptor	-
V1235_RS18700 (V1235_18680)	-	3843297..3843725 (-)	429	WP_000231981.1	DUF2946 family protein	-
V1235_RS18705 (V1235_18685)	def	3843762..3844292 (-)	531	WP_001196539.1	peptide deformylase	-
V1235_RS18710 (V1235_18690)	tsaP	3844415..3845569 (+)	1155	WP_000755280.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
V1235_RS18715 (V1235_18695)	dprA	3845590..3846720 (+)	1131	WP_002009557.1	DNA-processing protein DprA	Machinery gene
V1235_RS18720 (V1235_18700)	-	3846771..3847340 (+)	570	WP_000633612.1	Sua5/YciO/YrdC/YwlC family protein	-
V1235_RS18725 (V1235_18705)	-	3847732..3848652 (-)	921	WP_002023238.1	DMT family transporter	-
V1235_RS18730 (V1235_18710)	-	3848758..3849408 (-)	651	WP_001984979.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42334.28 Da
• Isoelectric Point: 8.5909

>NTDB_id=928838 V1235_RS18710 WP_000755280.1 3844415..3845569(+) (tsaP) [Acinetobacter baumannii strain 2023CK-01512]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAFVLESDLPIKVGSSIQPPQFND

Nucleotide

• Length: 1155 bp

>NTDB_id=928838 V1235_RS18710 WP_000755280.1 3844415..3845569(+) (tsaP) [Acinetobacter baumannii strain 2023CK-01512]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATATTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAACTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTTTGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A009S0N9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	99.219	100	0.992