Detailed information NTG0928515

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB9K98_RS15590
• Genome accession: NZ_CP166764
• Coordinates: 3196537..3197562 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CRE444
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3191537..3202562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9K98_RS15560 (AB9K98_15560)	zapB	3191621..3191866 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AB9K98_RS15565 (AB9K98_15565)	rraA	3191951..3192436 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB9K98_RS15570 (AB9K98_15570)	menA	3192529..3193455 (-)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB9K98_RS15575 (AB9K98_15575)	hslU	3193522..3194853 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
AB9K98_RS15580 (AB9K98_15580)	hslV	3194863..3195393 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB9K98_RS15585 (AB9K98_15585)	ftsN	3195486..3196445 (-)	960	WP_000068834.1	cell division protein FtsN	-
AB9K98_RS15590 (AB9K98_15590)	cytR	3196537..3197562 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB9K98_RS15595 (AB9K98_15595)	priA	3197718..3199916 (-)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
AB9K98_RS15600 (AB9K98_15600)	rpmE	3200119..3200331 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=928515 AB9K98_RS15590 WP_000644904.1 3196537..3197562(-) (cytR) [Escherichia coli strain CRE444]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=928515 AB9K98_RS15590 WP_000644904.1 3196537..3197562(-) (cytR) [Escherichia coli strain CRE444]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628