Detailed information NTG0928451

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB9K89_RS22880
• Genome accession: NZ_CP166759
• Coordinates: 4714838..4715863 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CRE389
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4709838..4720863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9K89_RS22860 (AB9K89_22860)	metJ	4710899..4711216 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB9K89_RS22865 (AB9K89_22865)	yiiX	4711400..4712008 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB9K89_RS22870 (AB9K89_22870)	rpmE	4712069..4712281 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB9K89_RS22875 (AB9K89_22875)	priA	4712484..4714682 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AB9K89_RS22880 (AB9K89_22880)	cytR	4714838..4715863 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB9K89_RS22885 (AB9K89_22885)	ftsN	4715955..4716914 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB9K89_RS22890 (AB9K89_22890)	hslV	4717007..4717537 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB9K89_RS22895 (AB9K89_22895)	hslU	4717547..4718878 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB9K89_RS22900 (AB9K89_22900)	menA	4718945..4719871 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB9K89_RS22905 (AB9K89_22905)	rraA	4719964..4720449 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB9K89_RS22910 (AB9K89_22910)	zapB	4720534..4720779 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=928451 AB9K89_RS22880 WP_000644904.1 4714838..4715863(+) (cytR) [Escherichia coli strain CRE389]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=928451 AB9K89_RS22880 WP_000644904.1 4714838..4715863(+) (cytR) [Escherichia coli strain CRE389]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628