Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   VT264_RS07165 Genome accession   NZ_CP143266
Coordinates   1398914..1399510 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain JBCS608     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1393914..1404510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VT264_RS07135 (VT264_07135) - 1394128..1394583 (+) 456 WP_024085239.1 flavodoxin -
  VT264_RS07140 (VT264_07140) dapD 1394665..1395375 (+) 711 WP_003154598.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  VT264_RS07145 (VT264_07145) - 1395446..1396570 (+) 1125 WP_024085240.1 N-acetyldiaminopimelate deacetylase -
  VT264_RS07150 (VT264_07150) - 1396631..1396876 (+) 246 WP_003154596.1 YkuS family protein -
  VT264_RS07155 (VT264_07155) - 1396910..1397716 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  VT264_RS07160 (VT264_07160) - 1398004..1398462 (+) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  VT264_RS07165 (VT264_07165) rok 1398914..1399510 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  VT264_RS07170 (VT264_07170) - 1399531..1400523 (-) 993 WP_003154589.1 hypothetical protein -
  VT264_RS07175 (VT264_07175) - 1400669..1401271 (+) 603 WP_024085242.1 molybdenum cofactor guanylyltransferase -
  VT264_RS07180 (VT264_07180) - 1401323..1402342 (+) 1020 WP_024085243.1 molybdopterin-synthase adenylyltransferase MoeB -
  VT264_RS07185 (VT264_07185) glp 1402360..1403652 (+) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  VT264_RS07190 (VT264_07190) mobB 1403613..1404134 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=928405 VT264_RS07165 WP_003154591.1 1398914..1399510(+) (rok) [Bacillus velezensis strain JBCS608]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=928405 VT264_RS07165 WP_003154591.1 1398914..1399510(+) (rok) [Bacillus velezensis strain JBCS608]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCAGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATCTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843