Detailed information NTG0928347

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: AB9K51_RS20625
• Genome accession: NZ_CP166757
• Coordinates: 4133529..4134734 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain CRE287
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4128529..4139734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9K51_RS20610 (AB9K51_20615)	-	4129044..4130720 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
AB9K51_RS20615 (AB9K51_20620)	kdsB	4130730..4131470 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AB9K51_RS20620 (AB9K51_20625)	-	4131467..4133494 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
AB9K51_RS20625 (AB9K51_20630)	kpsS	4133529..4134734 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
AB9K51_RS20630 (AB9K51_20635)	-	4134884..4136113 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
AB9K51_RS20635 (AB9K51_20640)	-	4136103..4137251 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
AB9K51_RS20640 (AB9K51_20645)	neuC	4137244..4138419 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
AB9K51_RS20645 (AB9K51_20650)	-	4138416..4139672 (-)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=928347 AB9K51_RS20625 WP_001161835.1 4133529..4134734(+) (kpsS) [Escherichia coli strain CRE287]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=928347 AB9K51_RS20625 WP_001161835.1 4133529..4134734(+) (kpsS) [Escherichia coli strain CRE287]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387