Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | U6151_RS21735 | Genome accession | NZ_CP143257 |
| Coordinates | 4547445..4548593 (+) | Length | 382 a.a. |
| NCBI ID | WP_043579571.1 | Uniprot ID | A0A2R2IX26 |
| Organism | Chromobacterium subtsugae isolate delta-vioS | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4542445..4553593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U6151_RS21685 (U6151_21695) | rplK | 4543045..4543476 (-) | 432 | WP_043575242.1 | 50S ribosomal protein L11 | - |
| U6151_RS21690 (U6151_21700) | nusG | 4543580..4544113 (-) | 534 | WP_043575240.1 | transcription termination/antitermination protein NusG | - |
| U6151_RS21695 (U6151_21705) | secE | 4544113..4544469 (-) | 357 | WP_080509332.1 | preprotein translocase subunit SecE | - |
| U6151_RS21705 (U6151_21715) | tuf | 4544619..4545809 (-) | 1191 | WP_101527486.1 | elongation factor Tu | - |
| U6151_RS21725 (U6151_21735) | - | 4546295..4546546 (-) | 252 | WP_043579568.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| U6151_RS21730 (U6151_21740) | rsmD | 4546648..4547217 (-) | 570 | WP_043579569.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| U6151_RS21735 (U6151_21745) | pilA | 4547445..4548593 (+) | 1149 | WP_043579571.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| U6151_RS21740 (U6151_21750) | ftsE | 4548655..4549308 (+) | 654 | WP_043579573.1 | cell division ATP-binding protein FtsE | - |
| U6151_RS21745 (U6151_21755) | ftsX | 4549305..4550213 (+) | 909 | WP_043579575.1 | permease-like cell division protein FtsX | - |
| U6151_RS21750 (U6151_21760) | rpoH | 4550341..4551204 (+) | 864 | WP_043579577.1 | RNA polymerase sigma factor RpoH | - |
| U6151_RS21755 (U6151_21765) | - | 4551404..4553191 (-) | 1788 | WP_043579580.1 | PglL family O-oligosaccharyltransferase | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 40252.45 Da Isoelectric Point: 5.0571
>NTDB_id=928333 U6151_RS21735 WP_043579571.1 4547445..4548593(+) (pilA) [Chromobacterium subtsugae isolate delta-vioS]
MFSFFKKKPKPVETPQTETPAAVVDAAPALIAAPASPAAAALEAPAPAPAPDAVGDLPAETAAAVAPPASSEDAAPTPLK
KMSWTERLKAGLAKTRDRLGKQLAGLFGGGKIDEELYEELETVLLTADMGMDATVHLLKDVRERVSLKGLKDSSELKGAL
KDSLQDLIGPLEVPLDVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLIAWGERNDVTV
IAQQGGDSAAVCYDAILAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDANIGQNTVNQVK
AFDDALGLTGLILTKLDGTAKGGVIAAIAKQRPIPLRFIGVGESIDDLRPFDSRDYIDALFE
MFSFFKKKPKPVETPQTETPAAVVDAAPALIAAPASPAAAALEAPAPAPAPDAVGDLPAETAAAVAPPASSEDAAPTPLK
KMSWTERLKAGLAKTRDRLGKQLAGLFGGGKIDEELYEELETVLLTADMGMDATVHLLKDVRERVSLKGLKDSSELKGAL
KDSLQDLIGPLEVPLDVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLIAWGERNDVTV
IAQQGGDSAAVCYDAILAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDANIGQNTVNQVK
AFDDALGLTGLILTKLDGTAKGGVIAAIAKQRPIPLRFIGVGESIDDLRPFDSRDYIDALFE
Nucleotide
Download Length: 1149 bp
>NTDB_id=928333 U6151_RS21735 WP_043579571.1 4547445..4548593(+) (pilA) [Chromobacterium subtsugae isolate delta-vioS]
ATGTTCAGCTTCTTCAAGAAAAAACCGAAGCCGGTGGAAACACCGCAAACCGAAACGCCGGCAGCCGTCGTCGATGCCGC
TCCGGCACTCATCGCCGCGCCCGCCAGTCCGGCCGCCGCCGCGCTTGAAGCGCCTGCTCCGGCGCCGGCCCCTGATGCCG
TCGGCGATCTGCCGGCCGAAACCGCCGCCGCGGTTGCCCCGCCGGCCTCGTCCGAAGACGCCGCGCCGACGCCGCTGAAG
AAAATGAGCTGGACCGAGCGGCTGAAGGCCGGCCTGGCCAAGACCCGCGACCGCCTGGGCAAGCAGCTGGCCGGCCTGTT
CGGCGGCGGCAAGATAGACGAAGAGCTGTACGAAGAGCTGGAAACGGTGCTGCTGACCGCCGACATGGGCATGGACGCCA
CCGTGCATCTGCTGAAGGACGTGCGCGAACGGGTATCGTTGAAGGGCCTGAAGGATTCTTCCGAACTCAAAGGCGCGCTT
AAGGATTCGCTGCAGGACCTGATCGGCCCGCTGGAAGTGCCGCTGGACGTCGAAGGCAAGAAGCCGTTCGTGATCATGAT
GACCGGCGTCAACGGCGCCGGCAAGACCACTTCCATCGGCAAGCTGGCCAAGTACTACCAAAGCCAGGGCAAGAGCGTGC
TCCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATCGCCTGGGGCGAGCGCAACGACGTCACCGTG
ATCGCGCAGCAGGGCGGCGACTCCGCCGCCGTCTGCTATGACGCGATCCTGGCCGCCATCGCCCGCGGCATCGACATCGT
GCTGGCCGACACCGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAGGAAATCAAAAAGGTGAAGCGGGTGATCCAGA
AGGCATTGCCGGACGCGCCGCATGAAGTGGTGCTGGTGCTGGACGCCAATATCGGCCAGAACACCGTCAACCAAGTGAAA
GCCTTCGATGACGCGCTGGGCCTGACCGGCCTGATCCTGACCAAGCTGGACGGCACCGCCAAGGGAGGCGTGATCGCCGC
CATCGCCAAGCAGCGGCCGATCCCGCTGCGCTTCATCGGCGTCGGCGAAAGCATAGACGACCTGCGGCCGTTCGACAGCC
GCGACTACATCGACGCGCTGTTCGAATAA
ATGTTCAGCTTCTTCAAGAAAAAACCGAAGCCGGTGGAAACACCGCAAACCGAAACGCCGGCAGCCGTCGTCGATGCCGC
TCCGGCACTCATCGCCGCGCCCGCCAGTCCGGCCGCCGCCGCGCTTGAAGCGCCTGCTCCGGCGCCGGCCCCTGATGCCG
TCGGCGATCTGCCGGCCGAAACCGCCGCCGCGGTTGCCCCGCCGGCCTCGTCCGAAGACGCCGCGCCGACGCCGCTGAAG
AAAATGAGCTGGACCGAGCGGCTGAAGGCCGGCCTGGCCAAGACCCGCGACCGCCTGGGCAAGCAGCTGGCCGGCCTGTT
CGGCGGCGGCAAGATAGACGAAGAGCTGTACGAAGAGCTGGAAACGGTGCTGCTGACCGCCGACATGGGCATGGACGCCA
CCGTGCATCTGCTGAAGGACGTGCGCGAACGGGTATCGTTGAAGGGCCTGAAGGATTCTTCCGAACTCAAAGGCGCGCTT
AAGGATTCGCTGCAGGACCTGATCGGCCCGCTGGAAGTGCCGCTGGACGTCGAAGGCAAGAAGCCGTTCGTGATCATGAT
GACCGGCGTCAACGGCGCCGGCAAGACCACTTCCATCGGCAAGCTGGCCAAGTACTACCAAAGCCAGGGCAAGAGCGTGC
TCCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATCGCCTGGGGCGAGCGCAACGACGTCACCGTG
ATCGCGCAGCAGGGCGGCGACTCCGCCGCCGTCTGCTATGACGCGATCCTGGCCGCCATCGCCCGCGGCATCGACATCGT
GCTGGCCGACACCGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAGGAAATCAAAAAGGTGAAGCGGGTGATCCAGA
AGGCATTGCCGGACGCGCCGCATGAAGTGGTGCTGGTGCTGGACGCCAATATCGGCCAGAACACCGTCAACCAAGTGAAA
GCCTTCGATGACGCGCTGGGCCTGACCGGCCTGATCCTGACCAAGCTGGACGGCACCGCCAAGGGAGGCGTGATCGCCGC
CATCGCCAAGCAGCGGCCGATCCCGCTGCGCTTCATCGGCGTCGGCGAAAGCATAGACGACCTGCGGCCGTTCGACAGCC
GCGACTACATCGACGCGCTGTTCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
61.962 |
100 |
0.678 |