Detailed information NTG0928277

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB9X60_RS21950
• Genome accession: NZ_CP166435
• Coordinates: 4518792..4519817 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2024CK-00616
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4513792..4524817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9X60_RS21930 (AB9X60_21910)	metJ	4514853..4515170 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB9X60_RS21935 (AB9X60_21915)	yiiX	4515354..4515962 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB9X60_RS21940 (AB9X60_21920)	rpmE	4516023..4516235 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB9X60_RS21945 (AB9X60_21925)	priA	4516438..4518636 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AB9X60_RS21950 (AB9X60_21930)	cytR	4518792..4519817 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB9X60_RS21955 (AB9X60_21935)	ftsN	4519909..4520868 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB9X60_RS21960 (AB9X60_21940)	hslV	4520961..4521491 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB9X60_RS21965 (AB9X60_21945)	hslU	4521501..4522832 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB9X60_RS21970 (AB9X60_21950)	menA	4522899..4523825 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB9X60_RS21975 (AB9X60_21955)	rraA	4523918..4524403 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB9X60_RS21980 (AB9X60_21960)	zapB	4524488..4524733 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=928277 AB9X60_RS21950 WP_000644904.1 4518792..4519817(+) (cytR) [Escherichia coli strain 2024CK-00616]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=928277 AB9X60_RS21950 WP_000644904.1 4518792..4519817(+) (cytR) [Escherichia coli strain 2024CK-00616]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628