Detailed information NTG0928098

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB8K37_RS17680
• Genome accession: NZ_CP166186
• Coordinates: 3645284..3646309 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CRE78
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3640284..3651309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8K37_RS17660 (AB8K37_17630)	metJ	3641345..3641662 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB8K37_RS17665 (AB8K37_17635)	yiiX	3641846..3642454 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB8K37_RS17670 (AB8K37_17640)	rpmE	3642515..3642727 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB8K37_RS17675 (AB8K37_17645)	priA	3642930..3645128 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AB8K37_RS17680 (AB8K37_17650)	cytR	3645284..3646309 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB8K37_RS17685 (AB8K37_17655)	ftsN	3646401..3647360 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB8K37_RS17690 (AB8K37_17660)	hslV	3647453..3647983 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB8K37_RS17695 (AB8K37_17665)	hslU	3647993..3649324 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB8K37_RS17700 (AB8K37_17670)	menA	3649391..3650317 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB8K37_RS17705 (AB8K37_17675)	rraA	3650410..3650895 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB8K37_RS17710 (AB8K37_17680)	zapB	3650980..3651225 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=928098 AB8K37_RS17680 WP_000644904.1 3645284..3646309(+) (cytR) [Escherichia coli strain CRE78]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=928098 AB8K37_RS17680 WP_000644904.1 3645284..3646309(+) (cytR) [Escherichia coli strain CRE78]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628