Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AB9A07_RS09210 Genome accession   NZ_CP166018
Coordinates   1886998..1887738 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GIMC7004:SaO-15 isolate GIMC7004:SaO-15     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1881998..1892738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB9A07_RS09185 (AB9A07_09195) hemH 1882874..1883797 (-) 924 WP_001836880.1 ferrochelatase -
  AB9A07_RS09190 (AB9A07_09200) hemE 1883855..1884892 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  AB9A07_RS09195 (AB9A07_09205) - 1884882..1884992 (-) 111 WP_001790154.1 hypothetical protein -
  AB9A07_RS09200 (AB9A07_09210) traP 1885155..1885658 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  AB9A07_RS09205 (AB9A07_09215) - 1885782..1887005 (-) 1224 WP_001836879.1 ABC transporter permease EcsB -
  AB9A07_RS09210 (AB9A07_09220) pptA 1886998..1887738 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  AB9A07_RS09215 (AB9A07_09225) - 1887872..1888294 (+) 423 WP_000004981.1 HIT family protein -
  AB9A07_RS09220 (AB9A07_09230) - 1888436..1888801 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  AB9A07_RS09225 (AB9A07_09235) - 1889534..1890091 (+) 558 WP_000477963.1 DUF3267 domain-containing protein -
  AB9A07_RS09230 (AB9A07_09240) - 1890296..1891258 (+) 963 WP_000782121.1 foldase protein PrsA -
  AB9A07_RS09235 (AB9A07_09245) yhaM 1891379..1892320 (-) 942 WP_001244180.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=928026 AB9A07_RS09210 WP_000216874.1 1886998..1887738(-) (pptA) [Staphylococcus aureus strain GIMC7004:SaO-15 isolate GIMC7004:SaO-15]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=928026 AB9A07_RS09210 WP_000216874.1 1886998..1887738(-) (pptA) [Staphylococcus aureus strain GIMC7004:SaO-15 isolate GIMC7004:SaO-15]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545