Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8633_RS03125 | Genome accession | NZ_AP028340 |
| Coordinates | 602951..603334 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10312 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 597951..608334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8633_RS03105 (B10312_06200) | - | 598030..599964 (-) | 1935 | WP_052784541.1 | RNB domain-containing ribonuclease | - |
| R8633_RS03110 (B10312_06210) | ilvC | 600083..601105 (+) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| R8633_RS03115 (B10312_06220) | - | 601109..602191 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8633_RS03120 (B10312_06230) | dprA | 602181..602954 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8633_RS03125 (B10312_06240) | dprB | 602951..603334 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8633_RS03130 (B10312_06250) | - | 603363..604202 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8633_RS03135 (B10312_06260) | msrA | 604378..604875 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8633_RS03140 (B10312_06270) | ppa | 604917..605435 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8633_RS03145 (B10312_06280) | adk | 605445..606023 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8633_RS03150 (B10312_06290) | aspS | 606020..607771 (-) | 1752 | WP_032581037.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=92799 R8633_RS03125 WP_002852281.1 602951..603334(+) (dprB) [Campylobacter jejuni strain BCH-10312]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=92799 R8633_RS03125 WP_002852281.1 602951..603334(+) (dprB) [Campylobacter jejuni strain BCH-10312]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |