Detailed information NTG0927462

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: VXM69_RS17230
• Genome accession: NZ_CP142886
• Coordinates: 709198..710352 (+)
• Length: 384 a.a.
• NCBI ID: WP_034189261.1
• Uniprot ID: -
• Organism: Burkholderia sp. Ed8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 704198..715352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VXM69_RS17200 (VXM69_17180)	-	704837..705442 (+)	606	WP_034189265.1	50S ribosomal protein L25/general stress protein Ctc	-
VXM69_RS17205 (VXM69_17185)	pth	705563..706162 (+)	600	WP_034189264.1	aminoacyl-tRNA hydrolase	-
VXM69_RS17210 (VXM69_17190)	hisC	706281..707348 (+)	1068	WP_367189950.1	histidinol-phosphate transaminase	-
VXM69_RS17215 (VXM69_17195)	-	707431..707697 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
VXM69_RS17220 (VXM69_17200)	coaD	707757..708254 (-)	498	WP_021163047.1	pantetheine-phosphate adenylyltransferase	-
VXM69_RS17225 (VXM69_17205)	rsmD	708366..708980 (-)	615	WP_049034320.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
VXM69_RS17230 (VXM69_17210)	pilA	709198..710352 (+)	1155	WP_034189261.1	signal recognition particle-docking protein FtsY	Machinery gene
VXM69_RS17235 (VXM69_17215)	maiA	710435..711079 (-)	645	WP_034189260.1	maleylacetoacetate isomerase	-
VXM69_RS17240 (VXM69_17220)	ybiB	711258..712232 (+)	975	WP_034189259.1	DNA-binding protein YbiB	-
VXM69_RS17245 (VXM69_17225)	leuA	712612..714264 (+)	1653	WP_034189299.1	2-isopropylmalate synthase	-
VXM69_RS17250 (VXM69_17230)	-	714407..714790 (-)	384	WP_034189258.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40764.69 Da
• Isoelectric Point: 4.8609

>NTDB_id=927462 VXM69_RS17230 WP_034189261.1 709198..710352(+) (pilA) [Burkholderia sp. Ed8]
MFSFFKRFKKSQEPDPAESQSADAQQADEPSDAPAPVAPPAADVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTGRLTDPQQVKG
ALHDLLVELLTPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=927462 VXM69_RS17230 WP_034189261.1 709198..710352(+) (pilA) [Burkholderia sp. Ed8]
ATGTTCAGTTTCTTCAAACGATTCAAGAAATCGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAGCCGTCCGATGCGCCCGCGCCCGTGGCCCCGCCCGCGGCCGACGTGCCGCAGGCACCCGCGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAGGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCGTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCACCGG
CGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ATGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACGGGCCGGCTGACCGACCCGCAGCAGGTGAAGGGC
GCGCTGCACGACCTGCTCGTCGAACTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCGCCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGATACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGATACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTAAAGCGCGTGA
TTGCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTGAAGGCATTCGACGACGCGCTCGGCCTCACGGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAACGCCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGACCTGCAGCCGTTCA
GCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.197	100	0.589