Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   VXJ98_RS10085 Genome accession   NZ_CP142855
Coordinates   2019346..2020011 (-) Length   221 a.a.
NCBI ID   WP_017175466.1    Uniprot ID   A0A3S7GW29
Organism   Staphylococcus hominis strain Sh8213     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2014346..2025011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VXJ98_RS10065 (VXJ98_10065) - 2014750..2015514 (-) 765 WP_017175462.1 DUF4064 domain-containing protein -
  VXJ98_RS10070 (VXJ98_10070) - 2015606..2017561 (-) 1956 WP_017175463.1 FtsX-like permease family protein -
  VXJ98_RS10075 (VXJ98_10075) - 2017563..2018312 (-) 750 WP_017175464.1 ABC transporter ATP-binding protein -
  VXJ98_RS10080 (VXJ98_10080) braS 2018444..2019340 (-) 897 WP_017175465.1 sensor histidine kinase Regulator
  VXJ98_RS10085 (VXJ98_10085) braR 2019346..2020011 (-) 666 WP_017175466.1 response regulator transcription factor Regulator
  VXJ98_RS10090 (VXJ98_10090) - 2020024..2020191 (-) 168 WP_017175467.1 hypothetical protein -
  VXJ98_RS10095 (VXJ98_10095) - 2020360..2020533 (-) 174 WP_017175468.1 hypothetical protein -
  VXJ98_RS10100 (VXJ98_10100) - 2020915..2022390 (+) 1476 WP_017175469.1 alkaline phosphatase -
  VXJ98_RS10105 (VXJ98_10105) - 2022727..2022828 (-) 102 WP_017175470.1 SE2200 family small protein -
  VXJ98_RS10110 (VXJ98_10110) - 2022988..2023266 (-) 279 WP_017175471.1 hypothetical protein -
  VXJ98_RS10115 (VXJ98_10115) - 2023263..2023421 (-) 159 WP_017175472.1 hypothetical protein -
  VXJ98_RS10120 (VXJ98_10120) - 2023763..2024344 (-) 582 WP_329503301.1 poly-gamma-glutamate hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25323.13 Da        Isoelectric Point: 4.7234

>NTDB_id=927431 VXJ98_RS10085 WP_017175466.1 2019346..2020011(-) (braR) [Staphylococcus hominis strain Sh8213]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFGNILEEFKTVEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEITVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNAGKYVSRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=927431 VXJ98_RS10085 WP_017175466.1 2019346..2020011(-) (braR) [Staphylococcus hominis strain Sh8213]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGGTAATATTCTTGAAGAATTTAAAACTGTAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGTTACGTAGAACATATGATTTAACGGTTTCAAATAATGAAATTACTGTTAAAGGGTGTA
AGCTCGTTGTTGATGAAGCCACACTATATTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGCAGGGAAATATGTCAGTCGTACAGCAATCATTGAAAAATGTTGGGAATCGGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGTCTACGTAAAAAACTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S7GW29

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769