Detailed information NTG0927386

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: VWI91_RS11615
• Genome accession: NZ_CP142851
• Coordinates: 2438881..2440020 (-)
• Length: 379 a.a.
• NCBI ID: WP_041166137.1
• Uniprot ID: -
• Organism: Bordetella pertussis strain F
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2433881..2445020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VWI91_RS11595	phnC	2434579..2435349 (+)	771	WP_014905562.1	phosphonate ABC transporter ATP-binding protein	-
VWI91_RS11600	phnE	2435367..2436236 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
VWI91_RS11605	phnE	2436233..2437054 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
VWI91_RS11610	-	2437236..2438834 (+)	1599	Protein_2284	CYTH and CHAD domain-containing protein	-
VWI91_RS11615	pilA	2438881..2440020 (-)	1140	WP_041166137.1	signal recognition particle-docking protein FtsY	Machinery gene
VWI91_RS11620	rsmD	2440096..2440716 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
VWI91_RS11625	coaD	2440737..2441246 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
VWI91_RS11630	-	2441301..2441552 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
VWI91_RS11635	-	2441616..2442749 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
VWI91_RS11640	-	2442757..2443143 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 39740.45 Da
• Isoelectric Point: 6.1602

>NTDB_id=927386 VWI91_RS11615 WP_041166137.1 2438881..2440020(-) (pilA) [Bordetella pertussis strain F]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPAPMPAPQPEPQPEPQPQQPPEPQPPVAAAPEAPRKASW
LSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHL
RPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDP
AAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITL
TGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1140 bp

>NTDB_id=927386 VWI91_RS11615 WP_041166137.1 2438881..2440020(-) (pilA) [Bordetella pertussis strain F]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGATGCCGGCCCCCCAGCCCGAGCCGCAGC
CCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGG
CTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAA
CCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGC
GCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTG
CGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAA
GACGACCTCGATCGGCAAGCTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCC
GCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCG
GCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCT
GCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATG
AAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTC
ACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGT
GCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCG
CCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (95-154)

• SRP54-type protein, GTPase domain (SRP54) (175-377)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.623	91.029	0.488