Detailed information NTG0092691

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HQS1_RS25585
• Genome accession: NZ_AP025556
• Coordinates: 5578471..5579691 (+)
• Length: 406 a.a.
• NCBI ID: WP_016449076.1
• Uniprot ID: A0AAU0LD35
• Organism: Delftia lacustris strain HQS1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5573471..5584691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQS1_RS25565 (HQS1_50580)	coaD	5574241..5574741 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
HQS1_RS25570 (HQS1_50590)	rsmD	5574872..5575579 (-)	708	WP_016449073.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HQS1_RS25575 (HQS1_50600)	-	5575576..5576937 (-)	1362	WP_034366109.1	pitrilysin family protein	-
HQS1_RS25580 (HQS1_50610)	-	5576964..5578442 (-)	1479	WP_034366071.1	pitrilysin family protein	-
HQS1_RS25585 (HQS1_50620)	pilA	5578471..5579691 (+)	1221	WP_016449076.1	signal recognition particle-docking protein FtsY	Machinery gene
HQS1_RS25590 (HQS1_50630)	-	5579962..5580951 (+)	990	WP_096915397.1	tripartite tricarboxylate transporter substrate binding protein	-
HQS1_RS25595 (HQS1_50640)	cutA	5580938..5581336 (-)	399	WP_034366069.1	divalent-cation tolerance protein CutA	-
HQS1_RS25600 (HQS1_50650)	-	5581389..5582414 (-)	1026	WP_244387249.1	2-dehydropantoate 2-reductase	-
HQS1_RS25605 (HQS1_50660)	-	5582433..5583266 (-)	834	WP_264675423.1	class II aldolase/adducin family protein	-
HQS1_RS25610 (HQS1_50670)	-	5583259..5583804 (-)	546	WP_034366065.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42448.31 Da
• Isoelectric Point: 5.5266

>NTDB_id=92691 HQS1_RS25585 WP_016449076.1 5578471..5579691(+) (pilA) [Delftia lacustris strain HQS1]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=92691 HQS1_RS25585 WP_016449076.1 5578471..5579691(+) (pilA) [Delftia lacustris strain HQS1]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACGCCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.502