Detailed information NTG0926863

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB6907_RS03670
• Genome accession: NZ_CP165600
• Coordinates: 775185..776210 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. W3110 strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 770185..781210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6907_RS03650 (AB6907_03645)	metJ	771246..771563 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AB6907_RS03655 (AB6907_03650)	yiiX	771747..772355 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB6907_RS03660 (AB6907_03655)	rpmE	772416..772628 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AB6907_RS03665 (AB6907_03660)	priA	772831..775029 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AB6907_RS03670 (AB6907_03665)	cytR	775185..776210 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB6907_RS03675 (AB6907_03670)	ftsN	776302..777261 (+)	960	WP_000068828.1	cell division protein FtsN	-
AB6907_RS03680 (AB6907_03675)	hslV	777354..777884 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB6907_RS03685 (AB6907_03680)	hslU	777894..779225 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB6907_RS03690 (AB6907_03685)	menA	779292..780218 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB6907_RS03695 (AB6907_03690)	rraA	780311..780796 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB6907_RS03700 (AB6907_03695)	zapB	780881..781126 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=926863 AB6907_RS03670 WP_000644904.1 775185..776210(+) (cytR) [Escherichia coli str. K-12 substr. W3110 strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=926863 AB6907_RS03670 WP_000644904.1 775185..776210(+) (cytR) [Escherichia coli str. K-12 substr. W3110 strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628