Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   AB6W33_RS06880 Genome accession   NZ_CP163561
Coordinates   1286839..1287321 (-) Length   160 a.a.
NCBI ID   WP_000163516.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS-B4009     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1281839..1292321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6W33_RS06860 (AB6W33_06850) alsS 1282098..1283780 (-) 1683 WP_000140348.1 acetolactate synthase AlsS -
  AB6W33_RS06865 (AB6W33_06855) - 1283890..1285116 (-) 1227 WP_000934876.1 hypothetical protein -
  AB6W33_RS06870 (AB6W33_06860) - 1285106..1286296 (-) 1191 WP_001081539.1 AI-2E family transporter -
  AB6W33_RS06875 (AB6W33_06865) - 1286388..1286849 (-) 462 WP_000796045.1 NUDIX hydrolase -
  AB6W33_RS06880 (AB6W33_06870) mutX 1286839..1287321 (-) 483 WP_000163516.1 8-oxo-dGTP diphosphatase Machinery gene
  AB6W33_RS06885 (AB6W33_06875) - 1287538..1288851 (+) 1314 WP_000403407.1 hypothetical protein -
  AB6W33_RS06890 (AB6W33_06880) - 1288897..1290030 (+) 1134 WP_000564846.1 ISAs1-like element IS1548 family transposase -
  AB6W33_RS06895 (AB6W33_06885) hylB 1290115..1292082 (+) 1968 Protein_1280 hyaluronate lyase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18863.27 Da        Isoelectric Point: 4.4433

>NTDB_id=926810 AB6W33_RS06880 WP_000163516.1 1286839..1287321(-) (mutX) [Streptococcus agalactiae strain GBS-B4009]
MTKLATICYIDNGKELLLLYRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=926810 AB6W33_RS06880 WP_000163516.1 1286839..1287321(-) (mutX) [Streptococcus agalactiae strain GBS-B4009]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGTACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706