Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   VJ143_RS19015 Genome accession   NZ_CP142740
Coordinates   4083616..4084497 (-) Length   293 a.a.
NCBI ID   WP_004725801.1    Uniprot ID   N8YHY0
Organism   Acinetobacter guillouiae strain 13-3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4078616..4089497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VJ143_RS18990 (VJ143_19000) - 4079590..4079964 (-) 375 WP_327857788.1 cytochrome b562 -
  VJ143_RS18995 (VJ143_19005) coaBC 4080127..4081392 (-) 1266 WP_004725810.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  VJ143_RS19000 (VJ143_19010) radC 4081507..4082229 (+) 723 WP_004725808.1 RadC family protein -
  VJ143_RS19005 (VJ143_19015) - 4082267..4083178 (+) 912 WP_004725806.1 bestrophin family protein -
  VJ143_RS19010 (VJ143_19020) - 4083244..4083528 (+) 285 Protein_3717 antibiotic biosynthesis monooxygenase family protein -
  VJ143_RS19015 (VJ143_19025) tonB2 4083616..4084497 (-) 882 WP_004725801.1 energy transducer TonB Machinery gene
  VJ143_RS19020 (VJ143_19030) - 4084730..4085410 (+) 681 WP_327857789.1 hypothetical protein -
  VJ143_RS19025 (VJ143_19035) - 4085561..4086268 (+) 708 WP_004725798.1 DUF3108 domain-containing protein -
  VJ143_RS19030 (VJ143_19040) - 4086372..4086947 (+) 576 WP_004725796.1 xanthine phosphoribosyltransferase -
  VJ143_RS19035 (VJ143_19045) - 4087101..4087961 (+) 861 WP_327857790.1 acyl-CoA thioesterase II -
  VJ143_RS19040 (VJ143_19050) - 4088185..4088547 (+) 363 WP_004725792.1 hypothetical protein -
  VJ143_RS19045 (VJ143_19055) wrbA 4088657..4089250 (-) 594 WP_004725790.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33485.92 Da        Isoelectric Point: 7.4004

>NTDB_id=926655 VJ143_RS19015 WP_004725801.1 4083616..4084497(-) (tonB2) [Acinetobacter guillouiae strain 13-3]
MIKKLFANTQHSEYWWQDALFVGAVSAAVIAHVLFLSVQFGMPQENNTSTKEIAISIRPSEDEIKDADFLAQANQQGSGT
FRKEHRISSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKTAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHSILDEAAKNSVRKGAPFGRFDSKMKDISELRIVRTWRFDPAESEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=926655 VJ143_RS19015 WP_004725801.1 4083616..4084497(-) (tonB2) [Acinetobacter guillouiae strain 13-3]
ATGATAAAAAAATTATTTGCCAATACACAGCATTCTGAGTACTGGTGGCAAGACGCATTATTTGTTGGAGCTGTTTCTGC
AGCTGTCATTGCACATGTACTTTTTTTATCTGTTCAATTTGGAATGCCACAAGAAAATAATACCAGCACAAAAGAAATCG
CAATCAGTATTCGCCCAAGTGAAGATGAAATTAAAGATGCAGACTTTTTAGCGCAAGCAAATCAGCAAGGTTCTGGAACA
TTCCGTAAAGAGCATCGTATTTCAAGTGATATGCCAGCGCAAGCAGAAGACAAGAGTGCGGGTGATCAGCAACTCGAAGC
TTTAGAGCAAATACAGCAAAAACGAGAATTGAAATTCGAAGAAAAAGTATTAATGACGGTTCTTAGCTGGCAAAAGCAGG
CGGAACAAAACGATCGTAAAAAGGCCATGGAAGAGTTGCAGAGCCAGATGCAGGCTAAAACGGCAATGGTGGCGAGTTTA
GAAGCTCAATATTTACAGAAACAACAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGTATTCAAGCCAAACA
AGATGCATCTGCTGGATATTTAGATAAATTTCGCGAAAAAGTTGAGATGTATGGAAACCGATATTACCCAGATCTTGCCA
AACAGCAGCGTCTTTCGGGTGAGGTCCGTTTAATGGTCATTCTCAATAATGAGGGTGGGATTCGTGCTATACGATTGATT
GAAAGCTCAGGTCATTCAATCCTCGATGAAGCTGCCAAAAACTCAGTGCGTAAAGGTGCACCTTTTGGACGTTTTGATTC
AAAAATGAAAGATATTTCTGAACTGCGGATCGTGCGTACTTGGCGTTTTGATCCAGCTGAATCTGAATTTGAAGTGCGCT
AG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N8YHY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.672

100

0.717